Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3480 ATGCCTGAAGGGATCATCACAAAAAAGAGGATACATTTCAGCAAACTATATTCATTTTCTTGCTTGAAATCTTCATTTGGAGATGGGCATTCCCAAATCGGTCAGAAAGGGTACTCAAGGATTGTGTATTGCAATGATCCTGATAACCCTGATGCAATTCAGCAGAATTATAGAGGGAACTATGTGTCAACCACAAAGTACACAGCTTTTAATTTCATCCCCAAGTCCCTTTTTGAACAGTTTAGGAGGGTTGCAAATATATATTTTCTTGTTGTTGCTTGTGTTTCATTTAGTCCATTGGCACCTTATACAGCTCTCAGTATTGTTGCACCATTGTTGCTTGTCATTGGAGCTACTATGGCCAAGGAAGCTGTGGAAGATTGGAGGAGGAGAAAGCAGGATATAGAGGCAAACAACCGAAAGGTTCTGGTATATGGTAAAAATTATACATTTGTGGAGACTAGATGGAAAAAACTCCGAGTTGGTGATATTGTTAAGGTGTGTAAGGATGAATATTTTCCTGCTGATATTCTTCTGCTTTCGTCAAGCTACGGAGACGGGGTTTGCTATGTCGAGACAATGAATCTCGATGGAGAAACTAATCTAAAGTTAAAGCACGCCTTGGATGCAACGTCTCATCTTCAAGATGAAAAACCTATCCAGAAGTTCAGGGCTATGGTTAAATGTGAGGATCCTAATGAAAACTTATACTCATTTATTGGAAACTTGCACTATGAGGGTAAAGAATATCCTCTTTCCTTGCAGCAGATCCTTTTAAGAGACTCTAAGCTGAAGAACACTGATCATATCTTTGGTGTTGTAATCTTCACCGGACATGATACAAAAGTGATGCAGAATTCTACTGATCCTCCATCCAAGAGAAGCAAAATTGAGAGAAAAATGGATAAGATTATATACATCCTCTTCAGTACCTTGATTTTCATATCCTTTATTGGTTCTGTCTATTTTGGTGTTGAGACTAAAAGGGATACCAGCGGTCGCAGGTATCGAAGATGGTATGTTCGTCCCGACAGTACAACGGTCTTTTATGATCCGAGAAGTGCTACACTTTCTGCTCTTCTCCACTTTTTAACTGCTCTTATGTTGTTTGGATATCTTATTCCTATATCACTTTATGTGTCCATAGAACTTGTGAAAGTTCTTCAGAGTGTTTTCATCAACCGAGATCAGGAAATGTATTATGAGGAAATGGATAGGCCGGCTCGTGCTCGCACCTCTAATTTGAATGAGGAACTTGGTCAGGTTGATACTATATTATCTGACAAAACCGGTACTTTGACATGTAACTCGATGGAGTTTGTCAAATGTTCCATAGGAGGCATTCGATATGGCCGAGGTATGACAGAAGTGGAGAAGGCACTTGCAAGGAGAGGGAAAAATGTGGAGTCTCAAGTTGATGAAGCATCATGCGATTTTTCGGGCCAGGATAGTGACGTGGAGGACTCTCGGCCGCCAGTTAAGGGCTTTAACTTTAGAGATGAACGAATAATGAATGGGAAATGGGTTAATGAACCACAATCAGACATCATACAGAAGTTCTTTCGAGTTTTAGCTATTTGTCATACTGCTATTCCAGATGTAGATCAAGGGTCAGGAGAAATTTCTTATGAAGCTGAGTCACCAGATGAGGCGGCTTTTGTCATAGCTGCGAAGGAACTTGGTTTCGAGCTTTTCGCTAGGACACAAACAAGCATATCATTGCATGAATTAAACTACAAAACTGGAAAAAAGGTTGACAGAGTGTACCAGCTTCTGCATGTCCTAGAGTTCAGCAGTTCCCGCAAGAGAATGTCGGTGATAGTGAGGAATGAGGAAAATCAGTTGTTGCTCTTATGCAAGGGTGCAGACAGTGTAATGTTTGAAAGGCTGTCTGAAAAAGGAAGACAATATGAGGCCGAAACCAAAGAACATATCAAACAGTATGCCGAAGCAGGCTTAAGAACTCTGGTAATCACATACCGTGAACTTGATGAAGAAGAATATAAGTTATGGGAAGTAGAGTTTTCAAAGGCCAAAACATCTGTTGGAGCAGACCGAGATGCATTGGTCGATGCCGCTGCTGATAAGATGGAAAGAAATTTGATACTTCTTGGGTCTACAGCAGTTGAGGATAGACTGCAAAAGGGCGTTCCTGAATGTATTGAAAGGCTTGCTAAGGCAGGAATCAAGTTATGGGTGTTGACTGGGGACAAGATGGAAACAGCAGTCAATATAGGATATGCCTGCGGGTTACTTAGGCAAGACATGAAGCAGATAGTGATCACTCTTGATTCACCTAATATTATAGCACTTGAAAAGCAAGGGGATAAGGATGCTCTTAAAAAGGAATCTCTTGAAAGCATTAAGAAGCAAATTGGAGAGGGAATAAAGCAAATCAAGTTTGTGAAAGAGAGTACTAGTACAGATAAAGAGAGTTCTTCTTCATTCGGATTGATAATTGATGGGAAGTCTTTGGATTATTCGCTTAACAAGAACTTGGAGAATTCCTTCTTTGAGTTGGCAACTAGTTGTGCTTCCGTCATATGTTGCCGATCATCACCCAAACAGAAAGCTCGTGTTACAAAAATGGTAAAATTAGGAACTGGGCAGACAACATTATCCATCGGCGACGGGGCAAATGATGTCGGCATGCTTCAGGAGGCTGATATTGGAGTTGGCATTAGTGGTGCTGAAGGGATGCAGGCTGTAATGGCAAGTGATTTTGCAATAGCCCAATTCCGTTTTCTGGAGCGTTTGTTGTTGGTGCATGGCCACTGGTGTTATAGGCGAATATCAATGATGATATGCTATTTCTTCTATAAAAATATTGCATTTGGGTTCACCTTATTTTGGTTCGAGGCGTATGCTTCGTTCTCCGGCCAAGCTGCGTACAATGATTGGTATATGTCATTCTACAATGTCTTCTTCACTTCACTTCCAGTTATTGCTCTCGGTGTTTTCGATCAAGATGTTTCTGCTAAACTTTGCTTAAAGTATCCTTTTCTATATCTAGAGGGAGTAGAGGACACCCTCTTCAGCTGGCCGCGCATTATCGGCTGGATGGTTAACGGAGTCCTTAGCTCCTTAGCCATATTCTTCTTGACTGCAAACTCTGTCATGACTCAGGCCTTCAGAAGGGATGGTCAAGTGGTCGATTTCGAGATACTCGGCGTCACGATGTACACGTGTGTAGTGTGGACCGTGAATTGCCAAATGGCGCTTTCCATCAATTACTTCACTTGGATCCAGCATTTTTTCATCTGGGGCAGCATTGCATTCTGGTACGTATTCGTGCTGGTTTACGGCTACCTCTCGCCGGAAATATCGACGACGGCTCACATGGTGTTTGTGGAAGCTTGTGCTCCAAGTTTGCTATATTGGCTAGTTACCCTTTTGGTGGTTGTGTGTGCTCTTCTACCTTATTTTTGCTATAGATCATTCCAAAGTAGGTTTCTACCAATGTATCATGATATTATTCAGAGAAAACAAGTTGAAGGTTCTGATATTGAGATATGTGATGAGGTTCCTAAACAAGTCCATGGAAAACTAATACATCTAAGAGAGAGATTGAAGCAAAGGGAACTATGA 3588 0.4128 MPEGIITKKRIHFSKLYSFSCLKSSFGDGHSQIGQKGYSRIVYCNDPDNPDAIQQNYRGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLVVACVSFSPLAPYTALSIVAPLLLVIGATMAKEAVEDWRRRKQDIEANNRKVLVYGKNYTFVETRWKKLRVGDIVKVCKDEYFPADILLLSSSYGDGVCYVETMNLDGETNLKLKHALDATSHLQDEKPIQKFRAMVKCEDPNENLYSFIGNLHYEGKEYPLSLQQILLRDSKLKNTDHIFGVVIFTGHDTKVMQNSTDPPSKRSKIERKMDKIIYILFSTLIFISFIGSVYFGVETKRDTSGRRYRRWYVRPDSTTVFYDPRSATLSALLHFLTALMLFGYLIPISLYVSIELVKVLQSVFINRDQEMYYEEMDRPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIGGIRYGRGMTEVEKALARRGKNVESQVDEASCDFSGQDSDVEDSRPPVKGFNFRDERIMNGKWVNEPQSDIIQKFFRVLAICHTAIPDVDQGSGEISYEAESPDEAAFVIAAKELGFELFARTQTSISLHELNYKTGKKVDRVYQLLHVLEFSSSRKRMSVIVRNEENQLLLLCKGADSVMFERLSEKGRQYEAETKEHIKQYAEAGLRTLVITYRELDEEEYKLWEVEFSKAKTSVGADRDALVDAAADKMERNLILLGSTAVEDRLQKGVPECIERLAKAGIKLWVLTGDKMETAVNIGYACGLLRQDMKQIVITLDSPNIIALEKQGDKDALKKESLESIKKQIGEGIKQIKFVKESTSTDKESSSSFGLIIDGKSLDYSLNKNLENSFFELATSCASVICCRSSPKQKARVTKMVKLGTGQTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQAAYNDWYMSFYNVFFTSLPVIALGVFDQDVSAKLCLKYPFLYLEGVEDTLFSWPRIIGWMVNGVLSSLAIFFLTANSVMTQAFRRDGQVVDFEILGVTMYTCVVWTVNCQMALSINYFTWIQHFFIWGSIAFWYVFVLVYGYLSPEISTTAHMVFVEACAPSLLYWLVTLLVVVCALLPYFCYRSFQSRFLPMYHDIIQRKQVEGSDIEICDEVPKQVHGKLIHLRERLKQREL* 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3480 1195 SUPERFAMILY Calcium ATPase, transduction domain A 147 286 IPR008250 -
Amo05g3480 1195 SFLD p-type atpase 410 926 IPR044492 -
Amo05g3480 1195 Pfam Phospholipid-translocating ATPase N-terminal 42 105 IPR032631 -
Amo05g3480 1195 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 433 667 IPR023299 GO:0000166
Amo05g3480 1195 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1152 IPR023298 -
Amo05g3480 1195 Coils Coil 118 138 - -
Amo05g3480 1195 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 7 1178 - -
Amo05g3480 1195 SUPERFAMILY HAD-like 421 930 IPR036412 -
Amo05g3480 1195 Gene3D - 113 289 - -
Amo05g3480 1195 Gene3D - 703 915 IPR023214 -
Amo05g3480 1195 PRINTS P-type cation-transporting ATPase superfamily signature 875 894 - -
Amo05g3480 1195 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Amo05g3480 1195 Gene3D - 548 702 IPR023299 GO:0000166
Amo05g3480 1195 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Amo05g3480 1195 Pfam Cation transport ATPase (P-type) 545 630 - -
Amo05g3480 1195 SFLD Haloacid Dehalogenase 410 926 - -
Amo05g3480 1195 Pfam Phospholipid-translocating P-type ATPase C-terminal 903 1153 IPR032630 -
Amo05g3480 1195 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 846 958 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo05g3480 1195 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1161 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Amo05g3480 1195 CDD P-type_ATPase_APLT_Dnf-like 59 1035 - -
Amo05g3480 1195 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 7 1178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3480 Amo-Chr5 97920726 97927530 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3480 11 1194 Primary Pumps ATPases AT1G68710 62.551 0.0 1591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3480 K01530 - gmx:100817020 2077.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g3480 05 97920726 97927530 Amo15g1654 15 115223227 115228090 hybridization