Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3460 ATGGTAGCCATACTCCTTGGCATATTAGTATTTGTAGTCGCCATTATTGTTTGGCTGCATCCAAACGATAATCGGAATAAAGTTCCACCAGGTCCGAAGGCATTGCCACTCATCGGTAACCTCCACATGCTACGAAAACAACCACACCGCACCCTCCAAGCCCTCGCCGCAAAATACGGACCCATAATGTTCTTGAAGCTAGGGCAAGTTCCAACTGTCGTTGTTTCTTCTCCAGAAGCTGCTGAGCTCTTTCTCAAGACCCATGACCTAGATTTTGCAAACAGGCCTAAATTTCAGGTTGTGGAGACGTTTTTCAGTGGCAGTAAGGGGATTGGTATGGCACAGTACGGTTGGTATTGGCGGCACGTGAGGAAGTTGTGCACATTGCAACTTTTGAGTGGATCAAAAGTTGAGATGTATGGTCCTTTAAGGAGGAAAGAGTTGGGAATGTTGGTGAAGTCTTTATGCAATGCTTCTGCGTCGGGTGAGGTTTTGAATCTTAGTGTGATGCTGAAGGAGTTTTCTGAGAATATCACTTACAAGATGGTATTCGGTCGAACCCATGACAATAATAGGTTCAACTTAGAGGCCCTTGTTGACTTAGTCGGTTCTGCTGGAGCTTTCAATATTGCGGATTACGTGCCTATCCTTGGCATCTTTGATTTTCAGGGAATAAGAAAGAAAGTAAATAAATTAAGAAAGCCAATTAACGAGGCACTGGAGCATATTATTGAAGATCATCAGAATACCAACTACGATGATGATGATAATAGTCCACAGAAAAAGGATTTTGTTGACATATTGCTATCATTTTTGGATCAACCCATGGATCCTGATGAAGAACAACACAAACACGTTCTGACAAGAAATGACATCAAGGCTGTTATGATGGACATGATTGGTGCAGCATATGAAACATCAACTTCGGCAATTGAATGGGTTATGTCAGAGCTACTAAAGCATCCTAATGTGATGAAGAAACTTCAACACGAGATACAACATGCAGTCGGAGGAATTAACAAACAAGTTGAAGAGAATGAAATAGAGAATATGCCTTATTTGGATATGGTTGTGAAAGAGACCTTAAGATTATACCCAGTTGCACCTTTGTTAGTGCCTCATGTGTCTCGAAACGACGTCGTTATTGAAGGTTATTACATAAAAAGAAATACACAAATCATAATAAACGCATGGGCAATTGGAAGGGATCCAAGAGTTTGGTCAGAAAATGCAGAGAAGTTCTATCCAGAGAGATTCGAACATGATAATGTAGACATTCTTGGAGGTGACTTTAGATTCATACCATTTGGTTCTGGTCGAAGAGGGTGCCCTGGAGCTCAATTGGGATTTGCAACTATCAAGTTTGTTGTGGCTCAGTTGGTGCATTGCTTTAACTGGCAGCTCCCTTTTGGCATGTCTTGTGATGAATTAGACATGAATGAAACATTTGGCGTCACTATACCAAGAACTACACACTTGCTAGCTATTCCAACTTTTAGGCTAATAGCTGAAGCTGCTAGTGATAAAGAATAA 1533 0.4123 MVAILLGILVFVVAIIVWLHPNDNRNKVPPGPKALPLIGNLHMLRKQPHRTLQALAAKYGPIMFLKLGQVPTVVVSSPEAAELFLKTHDLDFANRPKFQVVETFFSGSKGIGMAQYGWYWRHVRKLCTLQLLSGSKVEMYGPLRRKELGMLVKSLCNASASGEVLNLSVMLKEFSENITYKMVFGRTHDNNRFNLEALVDLVGSAGAFNIADYVPILGIFDFQGIRKKVNKLRKPINEALEHIIEDHQNTNYDDDDNSPQKKDFVDILLSFLDQPMDPDEEQHKHVLTRNDIKAVMMDMIGAAYETSTSAIEWVMSELLKHPNVMKKLQHEIQHAVGGINKQVEENEIENMPYLDMVVKETLRLYPVAPLLVPHVSRNDVVIEGYYIKRNTQIIINAWAIGRDPRVWSENAEKFYPERFEHDNVDILGGDFRFIPFGSGRRGCPGAQLGFATIKFVVAQLVHCFNWQLPFGMSCDELDMNETFGVTIPRTTHLLAIPTFRLIAEAASDKE* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3460 510 Pfam Cytochrome P450 29 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3460 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Amo05g3460 510 Gene3D Cytochrome P450 22 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3460 510 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3460 510 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3460 510 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3460 510 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3460 510 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3460 510 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3460 510 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3460 510 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3460 510 SUPERFAMILY Cytochrome P450 29 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3460 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 502 - -
Amo05g3460 510 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 502 - -
Amo05g3460 510 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3460 510 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3460 510 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3460 Amo-Chr5 97425428 97433564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3460 25 498 Cytochrome P450 AT5G24950 37.214 3.49e-116 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3460 - - adu:107490367 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g3460 05 97425428 97433564 Amo13g2467 13 44232220 44239054 PCT