Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3453 ATGATAGCCATACTCCTTGGCATATTAGTATTTGTAGTCGCCATTGTTTTGTTGCATCCAAAGGATGATCGGAATAAAGTTCCACCACCAGGTCCCAAGGCATTGCCACTCATCGGTAACCTCCACATGTTAGGAACACAACCACACCGCACCCTCCAAGCCCTCGCCGAAAAATACGGACCCATAATGTTCTTGAAGCTAGGGCAAGTTCCAACTGTAGTTGTTTCTTCTCCGGAAGCTGCTAAGCTATTCCTCAAGACTCATGACCTAGATTTTGCAAACAGGTCTAAATTTCAGGCTGTGGAGATGTTTTTCAATGGCGGAAAGGGCATTGGGATGGCACAGTACGGTTGGTATTGGCGGCACATGAAGAAGTTATGCACATTGCAACTTTTAAGTGGATCAAAGGTTGAGATGTATGGTCCTTTAAGGAGGAAGGAATTGGAAATGTTGGTGAAGTCTCTATGCAATGCTTCTGCGTCAGGTGAGGTTGTGAATCTTAGTATGATGTTGAAGGAGCTTTCTGAGAATATCACATTCAAGATGGTGTTGGGTCGAAAGCATGAAAGTAATAGGTTCAACTTAAAGGCCCTTGTTGACTTAGTCAGCTTGGCTGGAGCTTTCAATATTGCAGATTACGTGCCTATCCTTGGCATCTTTGATTTTCAGGGAATAAGAAAGAAAGTAAATAAATTAAGAAAATCAATTGACGATACATTGGAGTATATTATTGAAGATCATCAAAATACCAACTACGATGATGATAATAATAGTCCACAGAAAAAGGATTTTGTTGACATATTGCTATCATGTTTGGATCAACCCATGGATCCTGATGAAGAACACGAACATGTTATAACAAGAAATGACATCAAGGCTATTATAATGGACATGATTGGTGCAACATATGAATCATCAACTTCGGCAATTGAATGGGTTATGTCAGAGCTACTAAAGCATCCAAGTGTGATGAAGAAACTTCAACATGAGATACAACATGTAGTTGGAGGAATTAATAAACAAGTTGAAGAGAGTGAAATAGAGAATATGCCTTATTTGGATATGGTTGTGAAAGAGACCTTAAGATTATACCCAGTTGCACCTTTGCTATTGCCTCATGAATCTCGAAACGACGTCGTTGTTGATGTTTGGTCAGAAAATGCAGAGAAGTTCTATCCAGAGAGATTTGAACATGATAATGTAGACATTCTTGGACGTGACTTTAGATTCATACCATTTGGTTCTGGTCGAAGAGGGTGCCCTGGAGCTCAATTGGGATTTGCAACTATCAAGTTTGTTGTGGCTCAGTTGGTGCATTGCTTTAACTGGGAGCTTCCTTTTGGCATGTCTTGTGATGAATTAGACATGAATGAAACATTTGGCATCACTATACCAAGAACCACACACTTGCTAGCTATTCCAACTTTTAGGCTAACAGCTGAAGCTGCTAGTAACAAAGAATAA 1464 0.4003 MIAILLGILVFVVAIVLLHPKDDRNKVPPPGPKALPLIGNLHMLGTQPHRTLQALAEKYGPIMFLKLGQVPTVVVSSPEAAKLFLKTHDLDFANRSKFQAVEMFFNGGKGIGMAQYGWYWRHMKKLCTLQLLSGSKVEMYGPLRRKELEMLVKSLCNASASGEVVNLSMMLKELSENITFKMVLGRKHESNRFNLKALVDLVSLAGAFNIADYVPILGIFDFQGIRKKVNKLRKSIDDTLEYIIEDHQNTNYDDDNNSPQKKDFVDILLSCLDQPMDPDEEHEHVITRNDIKAIIMDMIGATYESSTSAIEWVMSELLKHPSVMKKLQHEIQHVVGGINKQVEESEIENMPYLDMVVKETLRLYPVAPLLLPHESRNDVVVDVWSENAEKFYPERFEHDNVDILGRDFRFIPFGSGRRGCPGAQLGFATIKFVVAQLVHCFNWELPFGMSCDELDMNETFGITIPRTTHLLAIPTFRLTAEAASNKE* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3453 487 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3453 487 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3453 487 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3453 487 Pfam Cytochrome P450 29 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3453 487 Pfam Cytochrome P450 382 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3453 487 Gene3D Cytochrome P450 15 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3453 487 PANTHER CYTOCHROME P450 93A3-LIKE 382 479 - -
Amo05g3453 487 PANTHER CYTOCHROME P450 FAMILY PROTEIN 382 479 - -
Amo05g3453 487 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 382 - -
Amo05g3453 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Amo05g3453 487 PANTHER CYTOCHROME P450 93A3-LIKE 2 382 - -
Amo05g3453 487 SUPERFAMILY Cytochrome P450 29 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3453 487 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3453 487 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3453 487 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3453 487 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3453 487 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3453 487 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3453 487 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3453 487 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3453 Amo-Chr5 97346328 97354219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3453 29 475 Cytochrome P450 AT2G30770 39.241 9.68e-109 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3453 - - ahf:112799795 750.74