Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3446 ATGTTACCAATAATCCCAGCATGGTTCCTTCTTGTAGGGTTCATACTATTCATCCTCTCCACCACCATATTATTTCGGAAACAGAGCCAACAAAAACAGAAACAACCACCACCACCACCAGGTCCACCGGCTGTGCCGGTAGTAGGTCACCTCCACATATTAGGTGAACTTCCCCACCGCACCCTTGAAACCTTGTCCAAAAAACATGGTCCCATAATGTCTCTACGACTGGGACAAGTCCCAACCATCGTGATCTCTTCCCCGGAAGTGGCTGAGCTCTTCCTCAAGAAACACGACACCGTTTTTGCCAGCCGGCCTCTCCTCGAAGCTTCCAAGTACTTCTCCTATGGCTACAAGGGCATGATATTCGCCGAGTACGGTCCCTATTGGCGAAACATGAGGAAAGTGTGCACCTTGCAACTTCTGAGTGCATCCAAAGTGGAGTCCTTCGCACCTTTGAGGAAGTTGGAGCTCGGAAAAGCGGTTAAAACGGTTGCCAAAGCCGCGGAGGATGGCAAGGTTGTGAACCTCAGTGAGGTGGTTCATAGTGTTATGGAGGATGTGGTGTATAAAATGGTTTTGGGGTGTAACAAAGATGACAAGTTTGATTTGAAGGGACTTATTCATGAAATGTTGATCTTGGCTGGAAAATTTAATGTTACAGATTTTGTGCCTTGGCTTGGACCATTGGATTTACAGGGACTTAGACGAAACTTCAAGAAACTCAGTAAAGAAGTTGACGAAGTGCTTGAGAAAATAATCAAGGATCATGAACATGCTTCTTCAAACGCTCACAACAACAATGAGAAACATGGCAACAAGGACTTTGTGGACATATTACTCTCACAGATGCACCAACCAATTGACCCTTACGACGAACAAAATCATGTCATTGATCGCACCAACATAAAGGCTATTGTCTTAGACATGATCGCCGCGGCATTCGACACTTCCGCGACAGTTATTTTGTGGGCTTTATCCGAACTCTTAAGGAATCCAAGGGTGATGAAGAAGCTTCAAGAAGAGCTAAGAAATGTGGTTGGAATGAACAAGCTAGTGGAAGAGGTTGATTTACCAAAGTTGAGTTACTTAGATATGGTGATTAAAGAGGCGCTAAGATTACACCCTGCAGGAACGTTTATTACCCGGAAATCAATGAAAGACATTGTGATTCATAATTATTACATCAAGAAATCTTCAGAGATACTTGTGAATTTATGGGCAATAGGGCGAGATCCTAAGGTATGGTCGAATAATGCGCTTGAGTTTTATCCTGAGAGATTCTTGAATAAGAACGTGGATCTTCGTGGTTATGACTTTGAGTTGATACCATTTGGTTCTGGTCGTAGAGGGTGTCCTGGGATTCAATTGGGTCTTGTTACGGTTAAACTTGTCGTGTCTCAGTTTGTGCATTGCTTTGATTGGGAACTTCCATGGGGTATGAGTCCTAATGAATTAGACATGAGTGAGAAATATGGCATAACAGTCCCAAGAGTCAAGGATTTGCTTGCTGTGCCAGCGTTTCGTCTTCTTAGAATATTGGCACAAGATGAACCAAGTAAATAA 1566 0.4355 MLPIIPAWFLLVGFILFILSTTILFRKQSQQKQKQPPPPPGPPAVPVVGHLHILGELPHRTLETLSKKHGPIMSLRLGQVPTIVISSPEVAELFLKKHDTVFASRPLLEASKYFSYGYKGMIFAEYGPYWRNMRKVCTLQLLSASKVESFAPLRKLELGKAVKTVAKAAEDGKVVNLSEVVHSVMEDVVYKMVLGCNKDDKFDLKGLIHEMLILAGKFNVTDFVPWLGPLDLQGLRRNFKKLSKEVDEVLEKIIKDHEHASSNAHNNNEKHGNKDFVDILLSQMHQPIDPYDEQNHVIDRTNIKAIVLDMIAAAFDTSATVILWALSELLRNPRVMKKLQEELRNVVGMNKLVEEVDLPKLSYLDMVIKEALRLHPAGTFITRKSMKDIVIHNYYIKKSSEILVNLWAIGRDPKVWSNNALEFYPERFLNKNVDLRGYDFELIPFGSGRRGCPGIQLGLVTVKLVVSQFVHCFDWELPWGMSPNELDMSEKYGITVPRVKDLLAVPAFRLLRILAQDEPSK* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3446 521 Coils Coil 521 521 - -
Amo05g3446 521 Gene3D Cytochrome P450 23 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3446 521 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3446 521 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3446 521 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3446 521 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3446 521 Coils Coil 232 252 - -
Amo05g3446 521 Pfam Cytochrome P450 39 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3446 521 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 510 - -
Amo05g3446 521 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 510 - -
Amo05g3446 521 SUPERFAMILY Cytochrome P450 39 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3446 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Amo05g3446 521 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3446 521 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3446 521 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3446 521 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3446 521 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3446 521 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3446 Amo-Chr5 97194062 97200818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3446 10 507 Cytochrome P450 AT3G48320 38.400 7.76e-121 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3446 - - aprc:113867069 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2467 13 44232220 44239054 Amo05g3446 05 97194062 97200818 PCT