Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3399 ATGGGTGTATTCACAGTTCTGACACGGTGTATTGTGCAGCCTCTCTCGGTTGTTGATGACGAGCTTGTTCCGAAGGTCGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGGAACTACGCCAAGGCTGCAGGTTTCTCTACAAGAGTTCGGTGCACAAATAGGAAGGGAAACGAGATTAAGAATCAACTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCAACCGAGAAGACCAATCCGACAGCCGGTTTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGCTGACTGCAATTCTGCACCGTGCGTACGATAACGTCATGGCCGAGATGGAAGCATTAAAAGCCAAAAGGAAGGGGACATCTTCTTTATCCCACGAAGACGCCAACTTGGAATCCGTTAACGAGCTTCAAAGCCCGCCAAGGATTCGAACAAGAGGACGTCCAAAAAACAGGCTAGGTTCAAAGCTGGAGAAACAGATTGCAAATGCCACAAAGAAGAAGAAGACGAAAGTTTTAAGCGAGATAAACCTGTTTGATGCTGCATCAGCGGCGCATTCAAATTGCAGCCAATATCAGGGACAAGTTATAAATTATCAGTTCAGGGTACCAGCAGCAGGGGATAACTCTTTGGGTGTATAG 696 0.4468 MGVFTVLTRCIVQPLSVVDDELVPKVGMTFTTLEDAGKFYRNYAKAAGFSTRVRCTNRKGNEIKNQLITCSREGKWKSKISPTEKTNPTAGLNCPARIYIHTLKDVGAWIISKLTAILHRAYDNVMAEMEALKAKRKGTSSLSHEDANLESVNELQSPPRIRTRGRPKNRLGSKLEKQIANATKKKKTKVLSEINLFDAASAAHSNCSQYQGQVINYQFRVPAAGDNSLGV* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3399 231 MobiDBLite consensus disorder prediction 138 171 - -
Amo05g3399 231 Pfam FAR1 DNA-binding domain 38 115 IPR004330 -
Amo05g3399 231 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 158 - -
Amo05g3399 231 MobiDBLite consensus disorder prediction 144 158 - -
Amo05g3399 231 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 15 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3399 Amo-Chr5 96493480 96496049 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g3399 FAR1 1.9e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3399 - - adu:110276911 225.713