Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3387 ATGATAGGGATTCATGGAAATGGTGGATCAGGAAAAACAACAATAGCTCATGCAATTTATCATTTGATTGCTAATGGTTTTGAAAGTATATGTTTTCTGGAAAATGTGAGAGAAAATTCATATAAGCATGGTTTAGTACATCTTCAAGATATACTTCTTTCCAACATATTCGAAAGGAAGAATCTCAAATCAACAAGCGTTGAACAAGGAATTTCAAATATAAAGCACTGGCTCCAACAAAAGAAGATCCTTTTGATTCTAGATGATGTTGACAAGATAGAGCAGTTACAAGCTCTTGCTGGAAAACCTGATTGGTTCGGCCGTGGAACTAGAGTCATCATTACGACACGAGACAAAGATTTGCTAGTATGCCATGGCATTCAAAGAATATATCAGCTGGAGAATTCAAATCCGGAGTCAAATATCACTGCATCTGCAAGAAAAGACAACACAGAACAAGTGGTTGAAAAAATCATCGGTGGCCAAGTCAATGGTTCATTAGAGCCTCTATTTTCAGAAGATACTAATGTTGATAGAAGCAAACAAGTGTCGGTTATTCAAGCTCAATCAAATGCACAAGTCATATGTCAGTTTAATGAAAACCAAGCAGAGTTTTGTCATACATGTTCTCTAGAAAGAATAGAAAGTGCCAACATCACTTTGAAAGTGAAGGAGGAACTTGAAGTTAAAGACTTGTCTTTGTGTGCTAAGTTGGCATCTTTGGAGGAAAAGAAAAGAGAACTTGAAGAGCAAATTCGTGCAGTAAAAGCTGAGATTTCAGATTCTACAGCAGAGAGACAGTTGCTAAGAGAAAAAGAGTTGGCAATGGAAAAAAGCTGA 840 0.3667 MIGIHGNGGSGKTTIAHAIYHLIANGFESICFLENVRENSYKHGLVHLQDILLSNIFERKNLKSTSVEQGISNIKHWLQQKKILLILDDVDKIEQLQALAGKPDWFGRGTRVIITTRDKDLLVCHGIQRIYQLENSNPESNITASARKDNTEQVVEKIIGGQVNGSLEPLFSEDTNVDRSKQVSVIQAQSNAQVICQFNENQAEFCHTCSLERIESANITLKVKEELEVKDLSLCAKLASLEEKKRELEEQIRAVKAEISDSTAERQLLREKELAMEKS* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3387 279 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 150 IPR044974 GO:0006952
Amo05g3387 279 CDD AAA 4 116 - -
Amo05g3387 279 Pfam NB-ARC domain 2 121 IPR002182 GO:0043531
Amo05g3387 279 PRINTS Disease resistance protein signature 1 16 - -
Amo05g3387 279 PRINTS Disease resistance protein signature 77 91 - -
Amo05g3387 279 PRINTS Disease resistance protein signature 222 238 - -
Amo05g3387 279 Coils Coil 231 272 - -
Amo05g3387 279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 139 IPR027417 -
Amo05g3387 279 PANTHER ARCHAEAL ATPASE 1 150 - -
Amo05g3387 279 Gene3D - 1 129 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3387 Amo-Chr5 96332191 96333168 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3387 2 137 WRKY Transcription Factor Family AT5G45050 29.412 6.36e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3387 - - adu:107489825 546.969