Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3385 ATGAAGTTGTCTTATGTATTGAGCAGGAATAAATATGAACACGAGTTTATTGGGAAGATCGTTGAAGTAGTGTTAAGGGAGATTAAACGTGTCTCTTTACATGCTGATTATCCAATTGGATTAGAGTCTCAAGTGTCAGAAGTAAAGTCGCTACTATTCTCCGACGGCTATGATGGTGTCCACATGGTAGGGATTTATGGAAATGCCGGATCAGGCAAAACAACTATAGCTCATGCAATTTATCATTTGATTGCTAATGGTTTTGAAAGTATATGTTTTCTTGAAAATGTGAGAGAAAATTCATATAAGCATGGTTTAGTACATCTTCAAAACATACTTCTTTCCAACATTTTCGAAAGGAAGAATCTCAAATCAAGAAACATTGAACATGGAATTTCAACAATACAGCACTGGCTCCAACAAAAGAAGAAGACCCTTTTGATTCTAGATGATGTTGACAAGATAGAACAATTACAAGCTCTTGCTGGAAAACCTGATTGGTTTGGCCGTGGAACTAGAGTCATCGTTACAACCCGGGACAAACATTTACTAGAAAGCCATGGGATTGAAAGAATATATGTGATGGAGAATTCAAATTCGGAGTCAAATATCAGTGCATCAGCTGGAAAGGACAAGAGAGAACAACTGGGTGAAAAAAGCACTTTTGGTGATCAAGTCAATGGTTCGTTGGAACCTCTAGTTTCTGAAGATATTAGTCTTGAAAGGAGAAAACAAGCTTCTGTTATTCTAAGGGGAATCAAATACAGAAGTCATAGGTTGTAA 783 0.3691 MKLSYVLSRNKYEHEFIGKIVEVVLREIKRVSLHADYPIGLESQVSEVKSLLFSDGYDGVHMVGIYGNAGSGKTTIAHAIYHLIANGFESICFLENVRENSYKHGLVHLQNILLSNIFERKNLKSRNIEHGISTIQHWLQQKKKTLLILDDVDKIEQLQALAGKPDWFGRGTRVIVTTRDKHLLESHGIERIYVMENSNSESNISASAGKDKREQLGEKSTFGDQVNGSLEPLVSEDISLERRKQASVILRGIKYRSHRL* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3385 260 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 203 IPR044974 GO:0006952
Amo05g3385 260 Pfam NB-ARC domain 42 190 IPR002182 GO:0043531
Amo05g3385 260 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 200 IPR027417 -
Amo05g3385 260 Gene3D - 24 192 IPR027417 -
Amo05g3385 260 CDD AAA 39 178 - -
Amo05g3385 260 PANTHER ARCHAEAL ATPASE 5 203 - -
Amo05g3385 260 PRINTS Disease resistance protein signature 139 153 - -
Amo05g3385 260 PRINTS Disease resistance protein signature 62 77 - -
Amo05g3385 260 SMART AAA_5 59 199 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3385 Amo-Chr5 96295083 96296058 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3385 5 193 WRKY Transcription Factor Family AT4G12020 31.937 3.72e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3385 - - ahf:112803713 489.189