Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3377 ATGATAAATCTGGAAGTTCCCATATATGAAGTATTAGAATGGGATGGAACAGCCTTCAAGAAGATGAAAAATCTCAAAACACTTATCATTCAAAATGGTAAGTTTTCTAAAGGTCCCAAACATCTTCCAAATAGCTTAAGAGTTTTGGAATGGCAGGGATATCCTTTAGATTCTTTACCATCCGATTTTCGTCCAAAGAAGTTAGCCATACTCAACTTACCCAATAGTTGCTTTACATCATTCCAGCTTCTCAAGATACTGAAGACTTATGTTAATATGAGAGTCTTGAATTTCAGTGGAAATAGACAGACAACACAGATACCTGATGCATCCGGTGCCCCAAATTTAGAAGAATTATGCTTTGCAGATTGTGAGAATTTAATTAAAATTGACAAATCTGTTGGACTTTTGAGTAAACTCAAAATATTCGATGTTCAAGGTTGCCAAAAGCTAAGGAGGTTACCTTCGCTTGCATTGCCCTCTCTTGAAAAACTTTATCTCTCAGGTTGTTCAAGTCTCGTGAGTTTTCCAGAAATACAAGGAAAAATGAAGAAGTTAAGACAACTCTCTTTGATTGACACTTGTATAAAGGAGTTGCCTTATTCTATTTATAATCTTTCTGGGCTTCAACTATTAGAACTGCGTCACTCCGGAATTATTCTATTGCCAAGCAGCATTTTCATGTTGAGAGAACTTAATGCTTTGGACTTGTGGGAATGTGAGTGCTTGCTAGCATATGAAGGTGATGATATAGAGCAAGTGAGCTTAGTGCTGTCTTCAAATGCAACAAGTCTTGATTTCAGTACTTGCAATATATCTGATGAATTCCTTCAAATATTTCTTCCTCAGTTTCCCAATGTGCAAGTTTTAAACTTGTCATATTGTAATTTCACAATTCTCCCGGAATGCATCAGCGAATGCCGCTTTTTGGAGATTCTTTATCTGAATGAATGCAAGAATCTACAAGAAATTAGAGGGATTCCACCCAACATAGAAATATTGTATGCAATGCACAACACATCCATGAGTTACTCCAGCAGAATGACATTGTTGAATAAGGAGTTCCATGAGGATGGTGGAGACAAGGCATTTATTTTGCCAGGAACAGAGGTTCCAGATTGGTTTGAACTTCAGAGTGATGGACAACCAATATCTTTCTGGTTTCGTAATAAGTTCCCTGCCTTATCTCTCTGTGTTCTTTTTAACCAAAGGCTTACTAATCATAGAGAACTTCGGATTGGAGTGAGATTGATCATCAAAGGCAACAACAATTTTGAAGAACTTTTTAATGAAACTTTGAATATAGTATCACATCTTCATCATGTATATATCTGTAGTATGAAGCAAGTAACCTTTGCAGCTGATGTGGATGAAATGCTTTTGAAAAATGGATGGAACAAAGCAGTAATATCTCTTTACCATTACAACATATTTGTGCCTCGAGAATTGGAGGATTTGGGGAGCATGCAAATTGGAGTTCATGTAATTGAAAAAAGAAGTAACATGCAAGATATCCGATTCTCCGATCCTGACACTCATATCCAGTATAGTCCAATTCTTCTTAATTCCAGATGGTTATCTCAGGGTAAATATCATTTACTGAATCAAGAAACCTCAACAGTCACTGTCCAAGGTTTGCAAGAACAAAAAAATTTAACTCGGATCGATCATAAGAAGTTGAAAGGTCATAAAAAAGTGAACAAAGCAAAAAGGGAAGGAACAATGCTCAACATCAATTCCATGCAGGATATTGTTATTCTTACAAGTGAGGCCTCAAATGACAAGAACATGACACCAAAATCATGGAGTTACATGTCATGCGAACCGTGGGATCCAAGACACGAATCGCTTCCACTGGATTCATTGGATCCAATGCTATGGGAATCATGGGGTCCAGTGACACAGCCACAGGGATCATGGAATCCATCAGTGGCACGAGAATCATGGAATTCAATTGATTGTGAAGGGACAGATACAACAAACCAACTAGTTTCAAGTAAAGAAATAACCATGAGTGATAGTGACTCTGAAATGACGAGATTGAGTCATAGAACTGCCAAGTGGAAACTGTGGTTATGTGGTTTATTTTCTTCATCCATGTCTTCTTCCTCCTCTTCTCTGAGGGAAAGGCTCCTATAA 2139 0.3745 MINLEVPIYEVLEWDGTAFKKMKNLKTLIIQNGKFSKGPKHLPNSLRVLEWQGYPLDSLPSDFRPKKLAILNLPNSCFTSFQLLKILKTYVNMRVLNFSGNRQTTQIPDASGAPNLEELCFADCENLIKIDKSVGLLSKLKIFDVQGCQKLRRLPSLALPSLEKLYLSGCSSLVSFPEIQGKMKKLRQLSLIDTCIKELPYSIYNLSGLQLLELRHSGIILLPSSIFMLRELNALDLWECECLLAYEGDDIEQVSLVLSSNATSLDFSTCNISDEFLQIFLPQFPNVQVLNLSYCNFTILPECISECRFLEILYLNECKNLQEIRGIPPNIEILYAMHNTSMSYSSRMTLLNKEFHEDGGDKAFILPGTEVPDWFELQSDGQPISFWFRNKFPALSLCVLFNQRLTNHRELRIGVRLIIKGNNNFEELFNETLNIVSHLHHVYICSMKQVTFAADVDEMLLKNGWNKAVISLYHYNIFVPRELEDLGSMQIGVHVIEKRSNMQDIRFSDPDTHIQYSPILLNSRWLSQGKYHLLNQETSTVTVQGLQEQKNLTRIDHKKLKGHKKVNKAKREGTMLNINSMQDIVILTSEASNDKNMTPKSWSYMSCEPWDPRHESLPLDSLDPMLWESWGPVTQPQGSWNPSVARESWNSIDCEGTDTTNQLVSSKEITMSDSDSEMTRLSHRTAKWKLWLCGLFSSSMSSSSSSLRERLL* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3377 712 Gene3D Ribonuclease Inhibitor 9 248 IPR032675 -
Amo05g3377 712 PANTHER NB-ARC DOMAIN PROTEIN 11 416 - -
Amo05g3377 712 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 416 IPR044974 GO:0006952
Amo05g3377 712 SUPERFAMILY L domain-like 14 346 - -
Amo05g3377 712 Gene3D Ribonuclease Inhibitor 249 356 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3377 Amo-Chr5 96210006 96212608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3377 18 240 WRKY Transcription Factor Family AT4G12020 37.657 3.60e-29 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3377 - - ahf:112801816 504.597