Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3368 ATGTCAAGCTGGCTTATGCAAATTTCTCAACAAATCATGATCTTGCCTTTTAACATAACAACAATTCTTTACTATGTATCATTGTTTTTGTTTCTGTTTTTATTGTTTTTGAGCAACAATAACAAAAATAGTAGCCTGGTCTTGTGCAGTGATCAAAGTTTTTATCCACAAGAAAGGGAGGCTTTGTTGTTTATAAGGGATTCTCTAAATTCTTCTATTGATTTGCATGGGAATTGGGTTGGTCCACCATGCATTGGAGAAAATCAAAGCAAATGGTTTGGTATCACTTGTTCTAATTTTCATGTTGTTCACATTGTTCTTGAAGGGATTAACCTTAGTGGAACTTTGAAAAATCCTACATTCCTTCAAAACATTACTCTCTTGAAGAAACTCAGCTTCAGAAACAATTTGCTTCTTGGGATGCTACCAAATCTCACAAATTTGGTGTCTTTAGAAGAAGTGATCTTTTCAGATAATCACTTCTCAGGGAAAATTCCTTCTGGGTATGTTGATCTTCCTATTCTAAGAGTTTTGGAGCTGCAAGAGAATTACTTGGATGGTCAAATTCCATCCTTTGATCAACCATCATTGGAAAGTTTCAACCTTTCATATAATCATTTGGTGGGGCCTATTCCTCAGACTCATGTGATTCAAAGGTTTCCAGTGAGTTCCTTTGACAATAACACAGATCTTTGTGGAAAGCCATTGGATAAGTTATGTCCTGAACCTTCTCCTGCTCCATCTCCTATGCCAGAACCAGAAGTTAGAAAAAATAAGAGACTCAAAGTTTGGATTATTGCTTTGATTGCTTCTTCTTCTGCACTGTTTCTGTTTCTGATCATCGTTGCTTTGTTGTTTTGTAAAAGAAGGGCTAGTGCAGAAGAAACAAGAAGAAAAGATTCAAAAGATTCAGCAGGGTATGTATTTGGAGCATGGGCAAAGAAAATGGTGTCTCACTCCTTCAGTGAAGATTCTGAAAGATTAGGAAGATTGGAATTTTCCAACAAGAAGTTTCCAGTATTTGACTTAGATGATTTGTTAAGGGCATCAGCAGAAGTTCTAGGGAGGGGCAAATTGGGTATTACATACAAAGCAACACTTGAAAATGGTGCTCTTGTTGCTGTGAAGAAACTTAGCTGCATGAATGAATTGAGCAAAAAGGAATTTCTTCAGCAGATGCAATTGCTTGGGAGCATCAAGCATGAAAATCTTGTAGAGATTATATCTTTCTATTATTCGGAGGAGCAAAAGCTCATCATTTATGAGCTTATGAATGATGGAACTTTGTTTGAGCTCTTACATGAGGGTAGAGGAATTGGAAGAATGCCACTTGATTGGACCACAAGAATGTCCATTATCAAAGACATAGCAAAGGGTGTTGCATTTCTTCATGAATGTTTGTCATATCAAAAGGTCCCTCATGCAAACCTAAAATCAACCAATGTCCTAATTCAACAAGATAGCCAAGGAGCCTACAACCATTCCAAGCTCACAAATTATGGATTCTTTCCACTTCTAAGTTCAAAGAAGAAAAACCATGCTGAGAAACTAGCCATAAGCAAGTCAACAGAATTTGTCAAAGGGAAGAAACTAACACACAAAGCAGATGTTTATTGCTTTGGTATCATCATGCTTGAGATCATAACTGGGAAGATTCCTGGCCAAGTAACTAGTGCTAATGATGATGATATTGTAAGTGATCTTTCAGATTGGGTGAGAACTGTGGTGAACAATGATTGGTCCACAGATATATTGGATTTAGAGTTATTAGCAGAAAAAGAAGGGCATGATGCAATGTTGAAGTTAACTGAATTAGCACTAGAATGCACTCATGTTACACCAGATAATAGGCCTAAGATGAGTCAATTTTGA 1872 0.3681 MSSWLMQISQQIMILPFNITTILYYVSLFLFLFLLFLSNNNKNSSLVLCSDQSFYPQEREALLFIRDSLNSSIDLHGNWVGPPCIGENQSKWFGITCSNFHVVHIVLEGINLSGTLKNPTFLQNITLLKKLSFRNNLLLGMLPNLTNLVSLEEVIFSDNHFSGKIPSGYVDLPILRVLELQENYLDGQIPSFDQPSLESFNLSYNHLVGPIPQTHVIQRFPVSSFDNNTDLCGKPLDKLCPEPSPAPSPMPEPEVRKNKRLKVWIIALIASSSALFLFLIIVALLFCKRRASAEETRRKDSKDSAGYVFGAWAKKMVSHSFSEDSERLGRLEFSNKKFPVFDLDDLLRASAEVLGRGKLGITYKATLENGALVAVKKLSCMNELSKKEFLQQMQLLGSIKHENLVEIISFYYSEEQKLIIYELMNDGTLFELLHEGRGIGRMPLDWTTRMSIIKDIAKGVAFLHECLSYQKVPHANLKSTNVLIQQDSQGAYNHSKLTNYGFFPLLSSKKKNHAEKLAISKSTEFVKGKKLTHKADVYCFGIIMLEIITGKIPGQVTSANDDDIVSDLSDWVRTVVNNDWSTDILDLELLAEKEGHDAMLKLTELALECTHVTPDNRPKMSQF* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3368 623 Gene3D Phosphorylase Kinase; domain 1 313 423 - -
Amo05g3368 623 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 43 622 - -
Amo05g3368 623 Pfam Protein tyrosine and serine/threonine kinase 352 622 IPR001245 GO:0004672|GO:0006468
Amo05g3368 623 Gene3D Transferase(Phosphotransferase) domain 1 424 623 - -
Amo05g3368 623 ProSiteProfiles Protein kinase domain profile. 348 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g3368 623 SUPERFAMILY Protein kinase-like (PK-like) 351 622 IPR011009 -
Amo05g3368 623 Gene3D Ribonuclease Inhibitor 55 242 IPR032675 -
Amo05g3368 623 SUPERFAMILY L domain-like 55 214 - -
Amo05g3368 623 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 43 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3368 Amo-Chr5 96017397 96020803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3368 88 622 Receptor kinase-like Gene Family AT1G68400 34.958 5.87e-101 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo05g3368 PK_Tyr_Ser-Thr 1.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3368 - - aip:107641436 1158.28