Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3346 ATGGCTGATTGGACCTACGATGTGTTCTTGAGTTTCAGAGGCAAAGATATTCGGCAACGGTTCATTGGCCATCTCTATAAAGCTCTTTGCCGGAGGGGATTCCACACCTTCATTGATGACGTGGAGATCGAGCGAGGAGAGGATATCACACGCTCACTTCTCACTGCAGTTGAAAACTCCATGATTGCAATTCCGGTGTTCTCGGAAAACTATGCAACTTCAAGTTTCTGCTTGGACGAACTGGTTAACATCATGGAGTGTGCCAAGACGAAGGGGCAGATTGTTTTGCCGGTGTTCTATGACGTGGATCCTTCCGATGTGCGAAATCTGAGGGGGAGTTTTGGTGAAGCAATGGAGAAACATGAGGAGAGGATGAACCTCGAGGAAGATAAAGAGAGGTTGGAGAAATGGAAGATGGCTTTTATGCAAGCTGCTAATCTTTCTGGATTTCATTTTAAACTTGGGGCCGAAGCTGAATGCGAGTTTACTGAGAAGATTGTGAAAATAGTCTCCAAATGGATTCATCACACTTGTTTATATGTTTCAGATCAAGTAGTTGGACTAGAATCTCAGATTCCAGAACTGAACTTACTTTTGGATGTTGAATCCAGTGACAGAGTCCACATGGTAGGGATTCATGGCATTGGCGGAATAGGTAAAACAACTCTTGCTCGCGCCGTCTACAATTCCATTGCTGACTCATTTGAAGGTGTATGTTTTCTTGGTAATGTGAGAGAAAATTCAATAACACATGGCTTAGTATATCTCCAACAAATGCTGCTTTCAAAGTTAGTTGGTGATGAAAGAGATGTTAAGTTAGGTGATGTCAGTGAAGGAAAGAAGGTGATAGAGCGTAGGCTCAATCGAAAGAAGGTTCTGTTGATTGTTGATGATGTCGATAGATTAGAGCAGTTAAAAGCAGTTGCAGGGGACTCTGTTTGGTTTGGTTCTGGTAGTAGAATCATTGTAACAACTCGAAACAAAGGCTTGTTAACGAGTCATGGAATTGTAAGAACATATGAAGTAGGGAAGTTAAATGATAAAGAAGCTCTTGATTTACTTAGATGGAATGTTTTCAAAACAAGAGAGGTTGATCCAAGTTACTCATACATTTTGAACAGAACGGTTGCTTTTGCTTCTGGCTTGCCACTTGCATTGGAAGTAATAGGGGCTAATTTGTTTGGTAAGAGTAAAGATGAGTGGGAATCTGCTTTGGATCAGTATAAAAGAAGTCCTAAGAGAGAGATTCAAGAGATTCTTAAAGTGAGTTTTGATGGATTGGAGGAGGAAGAGAAGAAGATCTTTCTTGACATTGCTTGTTTCTTTAATGGATATAGATCCAAGTATGTTGAGGAGATACTGCGTGCTCATCACGGCTTTTGCCCCAAGAACAGCATGCGAGTTTTGATTGATAAGTCTTTGGTGAAGATTGAAGATGATAAAGTGATGTTACATGATTTGATTCAAGATATGGGTAGAGAAATTGTCCGACAAGAATCGGAAGAGCCTCGAGGGCGTAGCAGGATTTGGAACTTTGAGGATGCAAAACGTGTTTTGGAACAAGACAAGGGTAGCCATAAAATTGAAATGATAAAGCTAGCATTCCCCAAAGCTGATGAAAAACTTAATTGGGATGGTGTAGCATTCATGAAGATGAATAATCTCAGAACAATTGTTATTAATAAAGGTGACTTTTCAGACAGTCCCAAACATCTTCCAAATAGTTTGAAAAAGTTCATGAATTTGAGAGTTTTGAATTTCAGCAATTGCCAGCACCTAGAACAAATACCTGATTTATCTGTTGCCCCACATTTGGAAGAATTGTCTTTTTGTTGGTGTAAGAACTTAACTGAAGTTCATAAATCAGTTGGGTTGCTAAATAAACTTAGAATGTTGGATGCAAAGGGTTGTTGCAAGCTTAGGAGTTTTCCAGACCTTATGTTGCCTTCTCTCGAGAAACTCCGCCTTTCGTCTTGTTCAAGTCTTAAGAGTTTTCCAGAAATATTAGGGAAGATGGAAAGTTTAACAAAACTTGAGTTAGAATACACTCCAATAAAAGAATTCCCACCTTCAATTCGTTATATTACTAGGCTTGAAAGATTAGAATTGTGGAACTCTAAGATTGTTCTGTTGCCAAGTAGCATTTTTCTGATGAAAGAGCTTAAGTGCTTGAGAATTCGAAACTGTGATGGTTTGCTGTTACATTCACAAGAGAAAGTTGAGGAGCAAATAAGCTCAGTTGTGTTTTCCAATCAGCAACACTTTGATTTCAGAAACTGCAATGTATCAAATGAGTTTCTTCAAAGGAGTGTTCCTTGGTTAGTCAATGTGAAAGAGCTGAATCTATCATCCAACAGTTTCACAATTCTTCCTGCATGCATTGAAGGATGTACCTTCTTGAAGGTACTTATTTTGGATTATTGTGGGAATCTTCGAGAAGTCGGAGGGATTCCACCAAACATTGAAAAATTCTCTGCAAGAAGATGCATATCCTTAAAAAGTTTGGACCTCACTCTCCTATCATGCACCAAAGATTGTTACTTTCTGAAGGAACTCATTTTGGATGGTTGTGAGAATCTTGAGGAAATAAGGGGCATTCCACCTAGCATAGAAGTTTTGCATGCACCAAGCTCTACCTTGTTGACTTCCTCTTCTAGGAGCATGTTTTCTAACCAGGATTTACATGAGGATGCAAATGACAAGGAATCATGGCTGCCAATGCCAGGAACAAAAGTTCAGGAGTGGTTCAACTATTCTCGCCACGGATCATCAATTTCTTTCTGGTTTAGAAACAAGTTTCCAGCCATATCACTCTTTGTGATTAATGAACTGAAAAAGACTTCATTTGAACCCAAGTTGACCATCAATGGTCATGAAATGCATCTTTTTTCCTTATTCTCTCTGCAAAAAGATCACATACTGATTCTAACTCTGGGTCCAAAACAAACTGAATTCAAAGATGAGGTAAACAATGTGATTTCTAAAGATGAATGGAATCATGTGGAGTTGTCTTCTGATCATGCAGTGCATGGAGTAGGTGGTGGAACTATATATGAGAGCATGATGCAAATTGGACTCCATGTATTCAAGCAATTTAGTAACATGGAAGATATAAGATTCACTGATCCGTTCTTGTTGGAAGAAGTTCATAGCTTGGAGGGTATTGGATATTCTCCTACACAATTTGTGCAAAGGCATCAAAATTTGACTTCATTGGAAACAAATGTGGAGCAAGAAATAGTATCTCATTCATTGCTTCCATCTCCATCATTCAGTGACAACTTGAATTGGGAGTCAAACACAATTGTTACGGAGCACAAAACTAACACAATTAGTGTCCAAGCATATGAGGATAATCTAGCAAATGCTGTAGGAGAATCATATCAAACACCATCCATAGCTAACACAGAAAACGTTCATGACCCAATTCCCACCACTCCATCAAGTAGTGATAAAGATAGTGGACAGAAAATGTACACAGAAACTTGTAGCACCACTTTGCTAATAAAATTTGATGAGCCTTTGATAAATCAAGCTCCTCTAACTCAAGATGATAATGATGTGGAGATGGAAGCATTTTATGCTACTCTTGATGCTGAGACACATGATGATGTTCTTTCCCCGAATTCCGATGATGATCCAGCAACCACCACTGCTCCAAGCAAAGAAGCCAAGGAAGCATTGAAAACAGTACAAGACTTCATCACAAAGAATGATGCTTCAGTTTTGTTGGATGAAGAAAACTACAATGTCATGAAGAACAGTTTGCATTACCTATCCAATTTGTCTTCAAAAGATGGCATATCAGGAGAAGTTGAAACATTGGTATCAGAAGCTTCATGGTTGTTCAATTGTTGCAGTGTGGAATACATTGAATCATGTAGGAATATTGAGTCCACAGCATCAGAGCTACAAAGGGTTGATGAATTAGAAGCAGGATTGGAAGGAAACAAGAACAAGCACAGGGAGTTGAGGCAAAAGTTAGATTGGATGGAGAAAAGAAAGAAGGAGCTGGAAGAGGAAATGAATGCCATCAAAGCTAAGTTATGTGATTGTGAATCAGAAAAGAAGATTGTTGTTCAGAAAAAGAAAGATGTATTTGAAGAAGCAAAGACACTCAAAGCTCAAAGAGATGAGTGGAGGAAAAAAGTGCCACAATTGCGGCATCAACAGAGTATAGCAAAGAGTAATCATGCAAAATTCACAGGTGAATGGTCAAAACTAGGAGAAAAATTTCACACCATTGTTCTAGACTGA 4257 0.389 MADWTYDVFLSFRGKDIRQRFIGHLYKALCRRGFHTFIDDVEIERGEDITRSLLTAVENSMIAIPVFSENYATSSFCLDELVNIMECAKTKGQIVLPVFYDVDPSDVRNLRGSFGEAMEKHEERMNLEEDKERLEKWKMAFMQAANLSGFHFKLGAEAECEFTEKIVKIVSKWIHHTCLYVSDQVVGLESQIPELNLLLDVESSDRVHMVGIHGIGGIGKTTLARAVYNSIADSFEGVCFLGNVRENSITHGLVYLQQMLLSKLVGDERDVKLGDVSEGKKVIERRLNRKKVLLIVDDVDRLEQLKAVAGDSVWFGSGSRIIVTTRNKGLLTSHGIVRTYEVGKLNDKEALDLLRWNVFKTREVDPSYSYILNRTVAFASGLPLALEVIGANLFGKSKDEWESALDQYKRSPKREIQEILKVSFDGLEEEEKKIFLDIACFFNGYRSKYVEEILRAHHGFCPKNSMRVLIDKSLVKIEDDKVMLHDLIQDMGREIVRQESEEPRGRSRIWNFEDAKRVLEQDKGSHKIEMIKLAFPKADEKLNWDGVAFMKMNNLRTIVINKGDFSDSPKHLPNSLKKFMNLRVLNFSNCQHLEQIPDLSVAPHLEELSFCWCKNLTEVHKSVGLLNKLRMLDAKGCCKLRSFPDLMLPSLEKLRLSSCSSLKSFPEILGKMESLTKLELEYTPIKEFPPSIRYITRLERLELWNSKIVLLPSSIFLMKELKCLRIRNCDGLLLHSQEKVEEQISSVVFSNQQHFDFRNCNVSNEFLQRSVPWLVNVKELNLSSNSFTILPACIEGCTFLKVLILDYCGNLREVGGIPPNIEKFSARRCISLKSLDLTLLSCTKDCYFLKELILDGCENLEEIRGIPPSIEVLHAPSSTLLTSSSRSMFSNQDLHEDANDKESWLPMPGTKVQEWFNYSRHGSSISFWFRNKFPAISLFVINELKKTSFEPKLTINGHEMHLFSLFSLQKDHILILTLGPKQTEFKDEVNNVISKDEWNHVELSSDHAVHGVGGGTIYESMMQIGLHVFKQFSNMEDIRFTDPFLLEEVHSLEGIGYSPTQFVQRHQNLTSLETNVEQEIVSHSLLPSPSFSDNLNWESNTIVTEHKTNTISVQAYEDNLANAVGESYQTPSIANTENVHDPIPTTPSSSDKDSGQKMYTETCSTTLLIKFDEPLINQAPLTQDDNDVEMEAFYATLDAETHDDVLSPNSDDDPATTTAPSKEAKEALKTVQDFITKNDASVLLDEENYNVMKNSLHYLSNLSSKDGISGEVETLVSEASWLFNCCSVEYIESCRNIESTASELQRVDELEAGLEGNKNKHRELRQKLDWMEKRKKELEEEMNAIKAKLCDCESEKKIVVQKKKDVFEEAKTLKAQRDEWRKKVPQLRHQQSIAKSNHAKFTGEWSKLGEKFHTIVLD* 1419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3346 1418 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 841 1003 IPR044974 GO:0006952
Amo05g3346 1418 Gene3D - 344 428 IPR042197 -
Amo05g3346 1418 Gene3D Ribonuclease Inhibitor 516 660 IPR032675 -
Amo05g3346 1418 PANTHER ARCHAEAL ATPASE 841 1003 - -
Amo05g3346 1418 PANTHER ARCHAEAL ATPASE 16 835 - -
Amo05g3346 1418 Pfam TIR domain 6 175 IPR000157 GO:0007165
Amo05g3346 1418 Gene3D Ribonuclease Inhibitor 661 884 IPR032675 -
Amo05g3346 1418 Gene3D - 2 173 IPR035897 -
Amo05g3346 1418 Coils Coil 1363 1390 - -
Amo05g3346 1418 SUPERFAMILY L domain-like 484 868 - -
Amo05g3346 1418 PRINTS Disease resistance protein signature 209 224 - -
Amo05g3346 1418 PRINTS Disease resistance protein signature 646 662 - -
Amo05g3346 1418 PRINTS Disease resistance protein signature 286 300 - -
Amo05g3346 1418 PRINTS Disease resistance protein signature 379 393 - -
Amo05g3346 1418 Coils Coil 1307 1348 - -
Amo05g3346 1418 ProSiteProfiles TIR domain profile. 4 174 IPR000157 GO:0007165
Amo05g3346 1418 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 150 IPR035897 -
Amo05g3346 1418 SMART AAA_5 206 347 IPR003593 -
Amo05g3346 1418 Pfam NB-ARC domain 205 418 IPR002182 GO:0043531
Amo05g3346 1418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 438 IPR027417 -
Amo05g3346 1418 Gene3D - 174 337 IPR027417 -
Amo05g3346 1418 MobiDBLite consensus disorder prediction 1134 1157 - -
Amo05g3346 1418 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 835 IPR044974 GO:0006952
Amo05g3346 1418 SMART till_3 5 147 IPR000157 GO:0007165
Amo05g3346 1418 MobiDBLite consensus disorder prediction 1200 1224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3346 Amo-Chr5 95863027 95869820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3346 6 729 WRKY Transcription Factor Family AT4G12020 30.153 8.93e-71 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3346 - - ahf:112803708 2003.02