Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3331 ATGGCTTCGCCGTCTCCATCAACGGAAAGAAGGGTTGCCGGGGATGAAGATACCACTGGGGGCGTGCGTGTTGCCGAGGAAGTAGAAATGTGCGACGGAGCAGACCATGGAGTTGGATCGTTTGAGGGCGAAGGCTTTGCAAGGATGGAGTCGGACGAGTACGATTTACAGGAAGATGAAACAGAACACGACCATCATGCAAAGGCCGATGTCGACAATGGGGATGCGTTTGAATTGGAAGACAATTTGGACGTCGTCGGAGGAATGTCTGACAATTATGCGGATGATGACTTGTACGCTGTTGATTCCGGCGAATCAATAGGTTCGATTGATTTTTTGAAATTGAGCGAGGAGGAGGTTCTCCGCTTTAATTTCGCAGATGTTGATATTGTATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTCGGCACGAGACGTTCCAGAAGCGAAAAACGTGGCGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCCCGAAGTTCTACTCAATGCCTAATTGA 543 0.4936 MASPSPSTERRVAGDEDTTGGVRVAEEVEMCDGADHGVGSFEGEGFARMESDEYDLQEDETEHDHHAKADVDNGDAFELEDNLDVVGGMSDNYADDDLYAVDSGESIGSIDFLKLSEEEVLRFNFADVDIVFEFYQQYAKHHGFGTRRSRSEKRGEVRIRQEFVCHRQGYRSPKFYSMPN* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3331 180 MobiDBLite consensus disorder prediction 1 22 - -
Amo05g3331 180 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 68 174 - -
Amo05g3331 180 MobiDBLite consensus disorder prediction 53 73 - -
Amo05g3331 180 Pfam FAR1 DNA-binding domain 133 174 IPR004330 -
Amo05g3331 180 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 68 174 - -
Amo05g3331 180 MobiDBLite consensus disorder prediction 59 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3331 Amo-Chr5 95642008 95642689 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g3331 FAR1 6.7e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3331 - - aip:110265290 275.789