Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3330 ATGAGTATAAAAGAATTCCTAATAAAGATATCCAAAAGAAACTTAAAAGTAAGTTTTGATGCTTTGGAGGAATATCATCAGAAACTTTTTCTTGACATTGCTTGTTGCTTCAAAGGATATAGTTTTGATGATCTTGAAAATGTACTCCATGCTCTTCATGATGTTAGCCCGACACGTGGTATTCGAGTATTGGCTGAAAGATCTCTAATAAATATTGATAAGGATGGCCATGTGACACAGCATGACTTGATTCAAGATATGGGCAGAGAAATTGTTCGGCAAGAATCACCAAAAAATCCTGGTAAACGTAGTCGGTTATGGCTTCCTGAAGATATAATACGAGTTCTACAAGAGAATATTGGAACCAATGAAATTGAACTCATAATTCTGCAAGCTCCCACGTCTGAAGTAATAGAATGGGATGGAGAGGCTTTCAAGAAGATGGAAAACCTCAAAACACTTATTATTCTAAGTGGCAATTTTTCCAGAAGTCCTAATTATCTTCCAAATAGTTTAAGACTGTTGGAATGGCGGGAATATCCTTCATATTCTTTACCGGTTGATTTTCATCCAAAGAAGCTTGCCATACTCAAGTTGCCCAAAAATTGCTTAACACTGCTCCGGCTAGTTAAAGTATTAAAGGAGTTTGTGGAGATGAGTGTTTTGGATTTTAGTTGGAATGATTGGATAAAACATATCCCTGATGTTTCAGGTGCCCCAAATTTACAAGAATTAAACTTTGCATGTTGTGGCAATTTGATTAACGTTGATGAGTCAGTTGGATATTTGAGTAAACTTAGATCATTGGATTTTCAAGGTTGTACAAAGCTTAGGAACCTTCCTTCCCTTATGTTACCATCTCTTAGAAAACTCACTCTTGTGAATTGTTCAAGTCTTGAGAGTTTTCCTGAAATATTAGGAAAAATGGAAAAGATTACATATCTTGATCTATATTTCACTTCCATAAGAGAATTGCCATATTCCATTTGTAACCTTACTCGGCTTCAAGAATTCGATCTGCGTGATGGTGGAACTGTTCTATTGCCAAGTAGCATTTTCATGTTTGGAGAACTTCTTGAGCTGAAATTTCGTGGATATAAGAGTTTGCTATTATCTAATGAAGGTGGTGTGGAGCAAATGCCCTCAGTGTCAGCATCATCAACCACAAAACGCATTGATTTGTCTTCATGCAATATGTCAGATAAATTCCTCCAAATATTTATCTCTCAATTTTCCAATGTGCAAGAGTTGAACTTGTCAGAAAGTCATTTCACAATTCTCCCAGAATGTATCAAAGATTGTCACCTTTTGAGAATTCTTTATCTGACTGGCTGTAAGAATCTTCAAGAGATTAGAGGGATTCCACCCAACATGGAAATCTTGAATGCAACTGACAATACATCCTTGAATTGTTCAAGTAGAGAAGCATTATCGGATAAGAAATTGCATGATGAGGGTAGAAAGAGGAGATTCATTTTGCCAGGAACAAGGATACCAAGTTGGTTTGAGCATCAGAGGAGTGGAGAATCAGTTTCTTTCTGGTTCCGTAATAAGTTCCCTGCCATATCACTTTGTTTTCTTTTCACGGAAGCACTTGAATTTGATGATCAATGTTCTCTTTTCCCTCATCTAAAATTGGTCACCCATGATAATGACAATGGTGGGTGCATATTTAGTGATCAAAATCAAAGTTGCCCGCGTGCTACTTGCGGCCATAATAGGATTTATGATTTAGAAGATGATGAGGGTCAACAGTTTCAACAAAATGAATGGAATCAAGCGTTGGTCTCTCTTTCAGTTGAAGATAAGTCGGGTGAGAGGGAACTGAGGCCAGAGGAGTGGGGCAGCATAGAAATTGGAGTGCATATAATAGAAAAAAGAAGTAGCATGGATGATATCCAATTCACTCTTCCACTTTTGGACAAAGATCATCATAAAGCGCTGCAGATGAAAGATTCTCACAAGCACCATATGCAGCAACAACAAACAAGTTTGCCTTCATTGCAACCGGTTGATAATCTGAATTGGGACCCTCGTTCCTACATCGTTCGCAGACTTTACATTAAACCCAATAGATCAGAGCTCGCGTTATGGTCTTATGTCACCGGTGTTTCTTTATGCACCACTCAGACCCAAGACCACATGCCATCTTCAAAAGAGGCTCCAGGTGAATCTTCTCGTACCTCGTGTCGTGGGGATACTCTAAATATTCATGGCTCAAGTCCCCTGTCATTAAGTGGCAAGGCTAGTGAAGAAGATGTACCTTCAATATCCAGTTATACTGCTTCATCAACACCAACTGACAAATATTTGGGCGATGAAAATGTAACAAGTGATGATGATGATGTAGAAATGAATGCCTTTTATGCTTCACTAGATGTTTCTGGCATCCCTATGCTTCCTTGTTCCCGTGATAAGTTGGTCACCACCACTGTTTCGAAAGATAAAGAGGCCAGAGAAGCATTGAGATCAGTACAACACGTCATCTCGCATGATGCTTCAGTTTTGCTGCATCCTGAATTGTGCAGTATCTTGAAAGCCAACCTAGATCACCTCTGCAAGTTATCTGCAGATCATGGCAGAATATCAAGAGAAGCTAGCAAAGTGATATCGGAAGCTTCACGGTTTTTGACTCATTGGAGTAGGGACTACAGTGAAGCAAGTGTGAAAATTGATTCTATAATGTGTCATTTGCAGAAAGCTGATGAACTGGAAATGAGTCTGGAAAGTAACAAGAAAAGGTTCTTGGAAGTTGGGCAACTTGATGTTGATAAAGCTATGTGCATGTTTGGGCGCCATTATTTTGTTCAAAAAAGATCTTTTTTCAATGAAAAAAGATCTTTTTTTATTTTTTAG 2856 0.3834 MSIKEFLIKISKRNLKVSFDALEEYHQKLFLDIACCFKGYSFDDLENVLHALHDVSPTRGIRVLAERSLINIDKDGHVTQHDLIQDMGREIVRQESPKNPGKRSRLWLPEDIIRVLQENIGTNEIELIILQAPTSEVIEWDGEAFKKMENLKTLIILSGNFSRSPNYLPNSLRLLEWREYPSYSLPVDFHPKKLAILKLPKNCLTLLRLVKVLKEFVEMSVLDFSWNDWIKHIPDVSGAPNLQELNFACCGNLINVDESVGYLSKLRSLDFQGCTKLRNLPSLMLPSLRKLTLVNCSSLESFPEILGKMEKITYLDLYFTSIRELPYSICNLTRLQEFDLRDGGTVLLPSSIFMFGELLELKFRGYKSLLLSNEGGVEQMPSVSASSTTKRIDLSSCNMSDKFLQIFISQFSNVQELNLSESHFTILPECIKDCHLLRILYLTGCKNLQEIRGIPPNMEILNATDNTSLNCSSREALSDKKLHDEGRKRRFILPGTRIPSWFEHQRSGESVSFWFRNKFPAISLCFLFTEALEFDDQCSLFPHLKLVTHDNDNGGCIFSDQNQSCPRATCGHNRIYDLEDDEGQQFQQNEWNQALVSLSVEDKSGERELRPEEWGSIEIGVHIIEKRSSMDDIQFTLPLLDKDHHKALQMKDSHKHHMQQQQTSLPSLQPVDNLNWDPRSYIVRRLYIKPNRSELALWSYVTGVSLCTTQTQDHMPSSKEAPGESSRTSCRGDTLNIHGSSPLSLSGKASEEDVPSISSYTASSTPTDKYLGDENVTSDDDDVEMNAFYASLDVSGIPMLPCSRDKLVTTTVSKDKEAREALRSVQHVISHDASVLLHPELCSILKANLDHLCKLSADHGRISREASKVISEASRFLTHWSRDYSEASVKIDSIMCHLQKADELEMSLESNKKRFLEVGQLDVDKAMCMFGRHYFVQKRSFFNEKRSFFIF* 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3330 951 Gene3D Ribonuclease Inhibitor 302 483 IPR032675 -
Amo05g3330 951 MobiDBLite consensus disorder prediction 710 772 - -
Amo05g3330 951 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 539 IPR044974 GO:0006952
Amo05g3330 951 MobiDBLite consensus disorder prediction 710 777 - -
Amo05g3330 951 SUPERFAMILY "Winged helix" DNA-binding domain 15 117 IPR036390 -
Amo05g3330 951 PANTHER NB-ARC DOMAIN PROTEIN 13 539 - -
Amo05g3330 951 SUPERFAMILY L domain-like 127 475 - -
Amo05g3330 951 Gene3D Ribonuclease Inhibitor 92 301 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3330 Amo-Chr5 95587233 95592393 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3330 21 369 WRKY Transcription Factor Family AT4G12020 35.342 6.34e-44 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3330 - - ahf:112801816 1753.8