Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3326 ATGGCAAATCAAGATTCTTCTTCCACTTCTTGCTTAAACCATGGTTGGACATATGATGTCTTTGTGAGCTTCCACGGGAAAGACACGCGTCGCAACTTCACCGGCTACCTTGCCGATGCCTTGGACAGAAAGGGAATCCACATTTTCAGAGATGACATAAGGCTGAAGAAAGGAGAAGGGATTCCATATGCACTAGTCAAAGCAATTGAAGAGTCTAGAATTGCTGTGGTTGTTTTCTCAGAAAACTATGCATCCTCAAGTTGGTGTCTTGACGAGTTGGTTGAGATCATGGGGTGCATGAAAAAGAAGGGACAGTTGGTGATTCCAATTTTCTACTTTGTTGATGCTTCTGTGGTAAGGCATCAAAGGGAGAGTTTTGGAAGGTCAATGGAAAAGCATGAAGAAAGGCATGGCAAAAAGACAGTAAGTAAGTGGAGGATTGCATTGAAAGAAGCAGCCAATTTGTCAGGATGGAGTTTCAAAAATGGGTATGAGTATAAGTTTATTCAAGAGATTACTGAGAAAATATCAAGCATACTAAACATTACCTCCTTACACATTGCTGATCACCCAGTTGGATTAAACTATAGAGTGTCAAAAGTGTTGAGGCTCCTAGCACCAAATTCTAATGATATCAAAATGGTTGGAATCTATGGTATTGGTGGAATTGGCAAAACAACCATTGCTAGAGCTGTGTACAACTCAATTTCTAGCAGGTTTGAAGGGTCAAGCTTTCTTGCTGATGTGAGAGAAAATACAGTGAAACATGGTTTGGTCCAACTACAAGAGACTCTTCTCCATAATTTTCTTGGAGAAAACATCAATTTGGGTGATGTGAACAGAGGAATTCCCATAATAAAGAGAAGGCTTTGCACCAAGAAGGTTCTTCTGATTCTTGATGACGTCGACAACCTGCGACAACTGAGGTCATTGGCTGGCAGCCATGATTGGTTTGGTTCCGGAAGTAGGATCATCATAACAACAAGGGACAAACATTTGCTAACTGCTCATGGGGTTGAAAATGGAAACATATATGAAATGAAACAGTTGAATGATCATGAATCTCTTGAGCTATTTAGTTTAAATGCTTTTAGAAGAAAGCAGCCAAAGGAAAATTATGTCAACATTGCGAACCGCATGGTTCAATATGCCAAAGGCCTTCCACTGGCTTTGAATGTGATTGGTTCTGATCTGTTTGGCAAAACAATTGAAGAATGGGAAAGTGCATTGAAGAAATATGAAAGAATTCCAAGCAGAGAGATCTTAGATGTGCTCAGAGTAAGCTATGATAATTTGGATGATAATGAGAAGGAAATTTTCCTTGACATTGCATGTTTCTTCAAGGGAAACTTTAGACAGGATGTGGAAAAGACACTAGTGGCCTCACGTTTCTTTCCAGAATATGGCATTGGAGTACTTATTGACAAATCTCTAGTAACTATTAGTGATGCCAACACAATTAAGATGCATGATCTTATACAAGACCTTGGAAGAGACATTGCTAGAAAGGATTCGCCATTCGATCCGGGGAAACGTAGAAGACTATGGCACTGTGATGATGTTCTTGAGGTCCTGACAAAAAACACAGGAACTGATGCAATTGAAGGCATAATGCTGGACATGACCAACCTAAAACAAAAGGTTCCATTAAATTCCAACACCTTTGAGAATATGAAAAGACTTAGGATTCTCATAGTTCGGAATGCACAAGTTTCTGGAGCCCCCAATCATCTGCCAAATAATTTGAGATTGCTTGATTGGGATGAATATCCTTTACCTTCTTTGCCAGCTGATTTTCATCCAGAGACACTTGTTAAATTTGACCATTTGACATATATGAACTTCAGTGGTTGTGACTCTCTAACTACATTACCTGATGTGTCTGGAACACCAAATTTAACAAGAATTCTTGCTAATGATTGTCCAAACTTGGTTGAGATTCATGATTCTGTTGGACATCTCAACAAACTAGTCACACTGAGCACCGAACGATGTCCCAAACTCGAGGGATTTCCGAGTGGCCTGAGGTCAAAATCTCTTGAATACCTTAACCTTAGGGAATGTTCTAGCATTCAGAGTTTCCCAAATGTTTTGGAAAAAGTGGGAAGTATGAAAAATATTGATATAGGAGGGACTGCCATAAAAGACTTTCCAAACTCAGTTGAAAACTTTAGTAGTATTGAAGAGTTAATTTTGAGATCCTGCAAAAGTTTTGAGGTTCTACCTAGCAATCCTACCATGTTTCAAAATATTGAAGAGCTGAATGTGGAAGAATGTCCTCAACTTCCAAAACTCTTGTGGAAGTTATTAAAGGACAGAATTGATTCGCTCCCAAAGTTAAGTAGACTAACTCTCAAAAGTTGTGATCTATCAGATGAGGATCTTGAGTTAATTCTCAGCTGTTTTCTCCAATTGAAATGGTTGATCCTATCAAATAATAGCTTCACAACAATTCCTGATTGTATTGAAGATCTTTCAAGCCTCTTGCTGCTACATGTTGATAACTGCAATCAGCTTAGAGATATTTCAGTGCTTCCACCAGACTTACAATACATAAATGCAAGGAATTGCATGTCATTGACTTCGCGGTCATCAGATGTAATATTGAGTCAGGCATTTCATGAAGTTGAGTACTTAGACATTGTTGTGCTAAGGAGACAAATTCCAAAATGGTTTGACCATTGCTGCAAAGGAGGGTCTGCAGATTTCTGGGTTCGTAGAAAGTTCCCCAACATTGCTCTATTTTTTCTGTTAGGAGGCCAAGACGAACAGAGAACCGATCATATGTGCGAATTCCACTTGTTCATCAATGACCTCCTAGTATTTCAAGAAAAAAGAGGATGGCCAGTGGATCATGTATGGTTGTTTGATCTGCAAATTTACCTCACAGAAAGCGAACGACACAACATCAGGGAACAAATAAAGTCTGACTGGAATCATGTGAAGATTTCATGTTCAGTCATGAATGAGCCAAAAGATGTAATTGTTAAAGGCTGTGGAATCCATCTTTACAAGGAAAGAATGAACATCCATGATGTCTCCTTTATTAGTCCTGATCTACATGGCTCAAATAGTGCCTATGATAACATAAATGATGATTTGGATATTTATGATGAAACAAGCCAAGATGTTGTTTTCCCTACAGTATTAGCTAAATTCTTTCCCAAGAATATAGCTGAGCTCTTGGGAAATCTTCATTCCGGAAAAAGAACAGGTGATGATTTGTCTGATTATGATGAGGAGTTGGAACTAGACAGTGAGACTGACAACCAGTACATGGAAGTTGAAGAGGAGCAACATTCAGCTTCCATCAATCTTCAAATCCCAGAAATATGCAAAATCTCAAATCATGAGAAAGAAACAGATGCCAATTCCCACAAAATACTTATGGATCCTTCAAGAGGAACACAAGAAGCCTTTGTTAGTATCAATGAGGAAGAGCTAAAGCATCATAAGAAAGGAAAATTTAACAAGGATGGAATTGCCCCAGAGTCAAGTATGACTGCATCAAGAAGAATAAACAATGAAACACAAGTGGGAGATAAAATCAATTCTGGTAAAGAAATCAACAGTTCATCAAATCCTCATGTTTCTGAAAATATTGGTCTCCACAAGAGCAAACAAAAATCAATTATCCTAGTTGAAGCGAATGCAGAAGCTATTGATATAAATGAAAACCAAGTAGACATTTGTCATACTCATACTCATTTTCCAGCAAGAATCGATAATGGTCAACAATCAGTGCCTAATGCAGAAGCATACACAAGTATTGTTGAATCTTCTGTTAATGAGGACAACATGGAAGCATTTTATGCCTCCCTTGAAGCAGAGACAGATTCTGAGTCTTATCCCTATGGAAACCAAGCCAACATTGTATCTGTGATAACAAGGCCTAGCGAAGAAACAAAGAAAGAATTGCAGTTTCTGCGAGACTTGGTCACGAAAAAGTTCTCTCTTTTGTTACACCCTGGGCGTTCTGGATTGTTGAAAGATAAGCTAAAGTATCTCCTCACTTTGCCTCCAGAAGAAGGAGTTTCTCTGATAACAAAGTCATTGTTATCACAGCTTTCAACAAGTTTTGCACAATGGAGTGTGGATTACAACATTGCGAGTGTGAAACTTGAATCAGCAGACAAAGAACTATTGAGAGCTGAGAAAGTGAAAGAGGAACTTAAAGGGAACAAGGAAGAATACAAGGGAGTTAAGATGGTCGAAGATACTCTGCGGGATCAGTTGGAATCTTTGGAGGAAAAGAAGAGGGAGCTTGAAGTGCAAATCAATGCCATAAAAACCGAGATTGCAGATTTATCAGCAGAGAGTGACATAGCTGCTAAGAGAAAGAGAGAAGTATTTGAGAATGCAAAGATGCTGAGAAGTGAAAGGGATGGTTTGAGGAACCAAGTGCCAAGGTTGAAAGCTGAGAAAGAATGGGCAAAAGTAACACAGGCTAATATTGAAGCAGAGTGGTCATTGCTTGCAGAACAAGTCATTGGAATCACTACTTTTGAAGCATGA 4515 0.3885 MANQDSSSTSCLNHGWTYDVFVSFHGKDTRRNFTGYLADALDRKGIHIFRDDIRLKKGEGIPYALVKAIEESRIAVVVFSENYASSSWCLDELVEIMGCMKKKGQLVIPIFYFVDASVVRHQRESFGRSMEKHEERHGKKTVSKWRIALKEAANLSGWSFKNGYEYKFIQEITEKISSILNITSLHIADHPVGLNYRVSKVLRLLAPNSNDIKMVGIYGIGGIGKTTIARAVYNSISSRFEGSSFLADVRENTVKHGLVQLQETLLHNFLGENINLGDVNRGIPIIKRRLCTKKVLLILDDVDNLRQLRSLAGSHDWFGSGSRIIITTRDKHLLTAHGVENGNIYEMKQLNDHESLELFSLNAFRRKQPKENYVNIANRMVQYAKGLPLALNVIGSDLFGKTIEEWESALKKYERIPSREILDVLRVSYDNLDDNEKEIFLDIACFFKGNFRQDVEKTLVASRFFPEYGIGVLIDKSLVTISDANTIKMHDLIQDLGRDIARKDSPFDPGKRRRLWHCDDVLEVLTKNTGTDAIEGIMLDMTNLKQKVPLNSNTFENMKRLRILIVRNAQVSGAPNHLPNNLRLLDWDEYPLPSLPADFHPETLVKFDHLTYMNFSGCDSLTTLPDVSGTPNLTRILANDCPNLVEIHDSVGHLNKLVTLSTERCPKLEGFPSGLRSKSLEYLNLRECSSIQSFPNVLEKVGSMKNIDIGGTAIKDFPNSVENFSSIEELILRSCKSFEVLPSNPTMFQNIEELNVEECPQLPKLLWKLLKDRIDSLPKLSRLTLKSCDLSDEDLELILSCFLQLKWLILSNNSFTTIPDCIEDLSSLLLLHVDNCNQLRDISVLPPDLQYINARNCMSLTSRSSDVILSQAFHEVEYLDIVVLRRQIPKWFDHCCKGGSADFWVRRKFPNIALFFLLGGQDEQRTDHMCEFHLFINDLLVFQEKRGWPVDHVWLFDLQIYLTESERHNIREQIKSDWNHVKISCSVMNEPKDVIVKGCGIHLYKERMNIHDVSFISPDLHGSNSAYDNINDDLDIYDETSQDVVFPTVLAKFFPKNIAELLGNLHSGKRTGDDLSDYDEELELDSETDNQYMEVEEEQHSASINLQIPEICKISNHEKETDANSHKILMDPSRGTQEAFVSINEEELKHHKKGKFNKDGIAPESSMTASRRINNETQVGDKINSGKEINSSSNPHVSENIGLHKSKQKSIILVEANAEAIDINENQVDICHTHTHFPARIDNGQQSVPNAEAYTSIVESSVNEDNMEAFYASLEAETDSESYPYGNQANIVSVITRPSEETKKELQFLRDLVTKKFSLLLHPGRSGLLKDKLKYLLTLPPEEGVSLITKSLLSQLSTSFAQWSVDYNIASVKLESADKELLRAEKVKEELKGNKEEYKGVKMVEDTLRDQLESLEEKKRELEVQINAIKTEIADLSAESDIAAKRKREVFENAKMLRSERDGLRNQVPRLKAEKEWAKVTQANIEAEWSLLAEQVIGITTFEA* 1505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3326 1504 Pfam NB-ARC domain 196 415 IPR002182 GO:0043531
Amo05g3326 1504 SMART till_3 17 155 IPR000157 GO:0007165
Amo05g3326 1504 Gene3D - 349 433 IPR042197 -
Amo05g3326 1504 Pfam TIR domain 18 181 IPR000157 GO:0007165
Amo05g3326 1504 Gene3D - 185 340 IPR027417 -
Amo05g3326 1504 ProSiteProfiles TIR domain profile. 16 180 IPR000157 GO:0007165
Amo05g3326 1504 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 1040 IPR044974 GO:0006952
Amo05g3326 1504 Coils Coil 1447 1474 - -
Amo05g3326 1504 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1346 1478 - -
Amo05g3326 1504 Coils Coil 1374 1439 - -
Amo05g3326 1504 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 943 1281 - -
Amo05g3326 1504 Gene3D Ribonuclease Inhibitor 534 703 IPR032675 -
Amo05g3326 1504 Gene3D Ribonuclease Inhibitor 704 896 IPR032675 -
Amo05g3326 1504 PRINTS Disease resistance protein signature 214 229 - -
Amo05g3326 1504 PRINTS Disease resistance protein signature 823 839 - -
Amo05g3326 1504 PRINTS Disease resistance protein signature 289 303 - -
Amo05g3326 1504 PRINTS Disease resistance protein signature 384 398 - -
Amo05g3326 1504 Gene3D - 12 184 IPR035897 -
Amo05g3326 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 443 IPR027417 -
Amo05g3326 1504 SUPERFAMILY L domain-like 488 881 - -
Amo05g3326 1504 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Amo05g3326 1504 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 943 1281 IPR044974 GO:0006952
Amo05g3326 1504 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1346 1478 IPR044974 GO:0006952
Amo05g3326 1504 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 1040 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3326 Amo-Chr5 95558316 95564543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3326 18 765 WRKY Transcription Factor Family AT4G12020 30.828 8.27e-94 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3326 - - lja:Lj2g3v0582820.1 1886.31