Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3319 ATGATGCTGTATGGAGGGACTTCATCTTATGGCCGTGGATGGTCCTATGATGTATTCTTGAGTTTCAGGGGTGAAGACACAAGGAGGAGCTTTACAGGCTCACTTTACCACAGTTTGCACAAAAAGGGTATCAATGTTTTCATAGATGATGATAAGCTTAGGAGAGGGGAAGAGATTTCCCCAGCTCTTCTTAGAGCTATTGAAGAGTCAAGGATTTCCATCATTGTGTTCTCTCAAAACTATGCATCTTCCAAATGGTGTCTTGATGAGCTTGTTAAGATTCTTGAGTGCATGAAAACAAGGGGGCAATTGGTTTTTCCGGTTTTCTTCAATGTCGATGCTTCCATGGTGCGTTATCAGAAAGACAGTTTCGGCAGAGCAATGTCTGCCCATGAAGTCAGATACAAGGGTAATGAGGAGAAGTTGCAGAAATGGAAGCAGGCCTTGTTTGAAGCAGCTAATTTGTCTGGTTGGAGCTTTAAAAACGGGTATGAGTATGAGCTTATTGAAAAGATTGCTGAGGAGGTCTCAAAGAAAATCAATCAAACCCCTTTGCACATAGCTGAATACCCTGTTGGACTAGAAACTCGAATATCAGAYGTGAAAACTCTGCTGCAAATTGGACCTGGTGAAGATATTRGTGTGATRGGAATCTATGGACTTGGAGGTATAGGTAAAACAACGATTGCACGAGCTTTGTACAACTTMATTGCAGATCAGTTTGAAGCTGCAAGTTTCCTTGCMGACATAAGAGAAAGTTCAAATCAACGTCAAGGTTTAGTACAACTTCAAGAATCACTTCTGTTTGATATAGTTGGGGACAAGAACATTAAGTTGGGAAATATTTATAAAGGAATTCCTATTATAAYYAAAAGATTATGCTGCAAGAAAGTTCTTTTGATTCTTGATGATGTTGACAAATTGGAGCAGTTACAAGCATTAGCTGGAGGACGAGATTGGTTCGGTTTTGGCAGTGTAATAATTATAACAACAAGAGATAAGCATTTGCTAGCTGCTCATCAGGTTGATAAAACATATGAAGTAAAGAAACTAAATCATGGAGAAGCTTTTGAGCTGTTCATTTGGAATGCTTTCAAAAGAAAAGAACCTGAGGCAGGTTATATGGAGATTTCAAACCGTGTTGTGCTCCATGCTGAGGGGCTTCCGCTGGCACTGAAAGTAATGGGCTCAAATTTGATTGGAAAATCTGTGGATGAGTGGACATCTGCACTAGAAAAATATGAAAAGATTCCTAATAAAGAGGTTCAAAATGTACTTAGAGTGACCTATGATAATCTTGAGGAGAATGAGAAAGAAATTTTTCTGGATATAGCATGTTTCTTCAAAGGGGAGACAATGGAATATGTTGAAAAGACACTAAAAGCATGTGGTTTCCATCCGAAATTCGGTATTGGTGTACTTATTGATAGATCTTTAGTAAGTATTGATGAGTACAACAGATTGAGAATGCATGATCTGATTCAAGACATGGGTAGYGAGATTGRAAGAGAAGATTCYCCTRTGGAGCCCGGTAAGCGAAGTAGAATATGGTATCATGAAGATGTTATTGAAYTACTTACTGAAAGCACGGGGACTTACAAAATTCAAGGCATGATGGTGGACCTTCCAGATCAATACATGGTACACTTGAAGAATGATTCCTTCAAAAAAATGAAAAATCTTAAAATTCTCATAGTTCGAAATGGACAATTTTTTGGAAGCCCTCAAGATCTTCCAAACAATTTAAGGCTGCTTGATTGGATGGAGTATCCTTCATCATCTTTCCCATCTAGTTTCCTTCCAAAGAAACTTGCTGTGCTCAACTTGTCGCGCAGCCGTTTCGCAATGCAAGAGCCATTCAAGCATTTGGACACACTGACATCTTTGGATTTGAGTTACTGCGAAGTTTTAACAAAACTACCTGACTTTTCCGGAGTCCCAAATTTAACAGAACTAAATCTTGATTACTGTACAAATTTGGCAGAGGTTCATGACTCTGTTGGATTCCTTGAGAAGCTTGTTGAGTTGAGGGCCTATGGATGCACCAAGCTTAAGGTTTTTCCATCTTCGATCAAGATGACATCACTGCAAAGTCTTATCCTTAATTGGTGCTCAAGTCTCCAAAGTTTCCCATCTATTTTGGGAAAAATGGACAATCTCATGTCCATTTCTATAGAAGGAACTGGTATTGAACAATTGCCTCCTTCCATTGGAAACCTTGTTGGGCTTCAAGAATTTAGCATGACATCTTGCTTGAGTCTCAAGGAACTGCCAGAAAGCTTTGATATGTTGCAAAATCTTAWGAACCTTGATATCGAAGGATGTCCCCAATTSCGAAGCTTCTTGATGAAATTGAGAGAATCAGGAAAGTCTAGTCCTACCTTTGATAATGTGAAGTCTCTTAATCTCGAGAACTGTGGCCTTAGAGATGAAGATCTTCCCACAATTTTCTATTGTTTCCCAAAACTYTCTTTATTAGTCCTTTCAGGAAACTATTTTGTAACTCTTCCAAGTTGCATTCAAGAAATTCAAAGCTTGGAACTACTTCACTTGGACAGCTGCAACCTACTCCAAGAAATCCCTAGCATTCCTCCCAATATACAATACATTAATGCAAGAAATTGCACATCATTGAGTCCAAGGTCATCAAACTTATTATTGAGCCAGGAAATTTTTGAGGCATGTGAGTTACAGGTTATGGTGCCTGGAAGAAGAGTTCCAGAATGGTTTGATTTTTGTGCCAAAGGAGAATATCTGACGTTTTGGGCACGCCAAAAATTTCCTGTGCTTATTTTTTGCTTTGTTATTGAAGTAGAGGGTGCAACGGAGGATACTTTAAATTGTGAAGTCCAGTTCTCTATAAATGGTGAAGACATTTATGAAATGGAAATGCCACAATGCTTCTCAAAAATGGTCACAGATCATGTGTGGATATATGACTTACGAACGCATCCAACCATCCAGTGGCACAGTCTTGATTCATATCTAGTAGATGACTGGAATCAGCTTGAGATTTCATGTGAGAAAATAAGTGGATCATCAAATATGAGTGTGAGCTGGTGTGGAGTTCATATATGCAAAGAAGAAGTTAACATGGAGAATATACTATTCACAGACCCTGAACTTGATTTAGATTCAAACACATACTCTGAGGAGATCGAGGCTGATTTGAATGCTACCAGTGAAGAAAGCACAAAATCAGTACAAGATTTCTCCAAGAGTTTGAATGATAACTGCTGTGATTTTGAAAACACGGAAAGTTGTGACACGATCAGTAGACATGAAGAGGAATGGGGGGAAAGAAGTAAAGGAAAAGAAAATAGTGAAACTGCATCCCACAATGACATTGATCAGAGTGACAAGAAGATTTTAATGCATATGCAACCATTGGAAAGTGTTACTGAAGATCCAATTGCTCCTGTGTGTCTTGAGGTCATTGATACTGTCAAAGTAGTAGATTATGGATCAAATACAATAGTTGTTGATCATCCAGAAAAAGCTCAACCAAGATCCCAATTCAAAAGTTTTGTAGAGATACCAAATGTAGATGATGTAGAAATGGAAGCATTTTATGCATCTCTAGAAGCTGAGAKTTCTGTTCTTCKTCTCTCCAACAACACCATTGATGTTTCCYAATTRGCCAACAGAGTGCCAAGTGAAGCGACACAGAASGCATTAAAGACACTACAAGACTTTCTCACTAGAGACTTTTCTCTTCTTTTGGGCCCTGATGAGTACAATGCCATGAAAGCTACCTTAGAGTACCTCACAAATTTACCTCCAGGAGATGGGATTTCATTGGAATTAAGATCATTGGTTATAGAAGTTTCAAGACACTTCAACCATTGGAGTTTGGATTACACCAATGAGAGCCAGAAAATAGAGGCTGCCACAGCTAAGTTGTTGAAAGTTGATGAACTAGAAGAGGGTCTTGAAGCTAACAAGGTGCATTTTAGAGAAGTCGTGTGCTTAGAAAATGAGTTGAGAAACGAGTTGGAATATTTGGAGGAGAGAAAGAAGGAGCTTGAAGAACAAATACATGCCATTAAAGCTAGCATATCTGCTTCTGAATCAGCAAGGAACATGGTTACTTATAGAAAGAGAGAAATCTTTGGGGAAGCAAAGATATTAAAAAATAAAAGGGATGAATTGAAGGAGCAAGTGTCATGGTTGAAAGATGAGAAGGAATTGGCAAGGAAAATTCAGACAAATATCAGAGCTGAATGGTCAAAGCTTGGAGAAAAATTTAACAGAAAGTTAAAGTCTGAACTCTGA 4275 0.3836 MMLYGGTSSYGRGWSYDVFLSFRGEDTRRSFTGSLYHSLHKKGINVFIDDDKLRRGEEISPALLRAIEESRISIIVFSQNYASSKWCLDELVKILECMKTRGQLVFPVFFNVDASMVRYQKDSFGRAMSAHEVRYKGNEEKLQKWKQALFEAANLSGWSFKNGYEYELIEKIAEEVSKKINQTPLHIAEYPVGLETRISDVKTLLQIGPGEDIXVXGIYGLGGIGKTTIARALYNXIADQFEAASFLADIRESSNQRQGLVQLQESLLFDIVGDKNIKLGNIYKGIPIIXKRLCCKKVLLILDDVDKLEQLQALAGGRDWFGFGSVIIITTRDKHLLAAHQVDKTYEVKKLNHGEAFELFIWNAFKRKEPEAGYMEISNRVVLHAEGLPLALKVMGSNLIGKSVDEWTSALEKYEKIPNKEVQNVLRVTYDNLEENEKEIFLDIACFFKGETMEYVEKTLKACGFHPKFGIGVLIDRSLVSIDEYNRLRMHDLIQDMGSEIXREDSPXEPGKRSRIWYHEDVIELLTESTGTYKIQGMMVDLPDQYMVHLKNDSFKKMKNLKILIVRNGQFFGSPQDLPNNLRLLDWMEYPSSSFPSSFLPKKLAVLNLSRSRFAMQEPFKHLDTLTSLDLSYCEVLTKLPDFSGVPNLTELNLDYCTNLAEVHDSVGFLEKLVELRAYGCTKLKVFPSSIKMTSLQSLILNWCSSLQSFPSILGKMDNLMSISIEGTGIEQLPPSIGNLVGLQEFSMTSCLSLKELPESFDMLQNLXNLDIEGCPQXRSFLMKLRESGKSSPTFDNVKSLNLENCGLRDEDLPTIFYCFPKLSLLVLSGNYFVTLPSCIQEIQSLELLHLDSCNLLQEIPSIPPNIQYINARNCTSLSPRSSNLLLSQEIFEACELQVMVPGRRVPEWFDFCAKGEYLTFWARQKFPVLIFCFVIEVEGATEDTLNCEVQFSINGEDIYEMEMPQCFSKMVTDHVWIYDLRTHPTIQWHSLDSYLVDDWNQLEISCEKISGSSNMSVSWCGVHICKEEVNMENILFTDPELDLDSNTYSEEIEADLNATSEESTKSVQDFSKSLNDNCCDFENTESCDTISRHEEEWGERSKGKENSETASHNDIDQSDKKILMHMQPLESVTEDPIAPVCLEVIDTVKVVDYGSNTIVVDHPEKAQPRSQFKSFVEIPNVDDVEMEAFYASLEAEXSVLXLSNNTIDVSXLANRVPSEATQXALKTLQDFLTRDFSLLLGPDEYNAMKATLEYLTNLPPGDGISLELRSLVIEVSRHFNHWSLDYTNESQKIEAATAKLLKVDELEEGLEANKVHFREVVCLENELRNELEYLEERKKELEEQIHAIKASISASESARNMVTYRKREIFGEAKILKNKRDELKEQVSWLKDEKELARKIQTNIRAEWSKLGEKFNRKLKSEL* 1425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3319 1424 Gene3D - 350 434 IPR042197 -
Amo05g3319 1424 ProSiteProfiles TIR domain profile. 14 180 IPR000157 GO:0007165
Amo05g3319 1424 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 1161 IPR044974 GO:0006952
Amo05g3319 1424 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1260 1398 IPR044974 GO:0006952
Amo05g3319 1424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 444 IPR027417 -
Amo05g3319 1424 PRINTS Disease resistance protein signature 292 306 - -
Amo05g3319 1424 PRINTS Disease resistance protein signature 385 399 - -
Amo05g3319 1424 PRINTS Disease resistance protein signature 621 637 - -
Amo05g3319 1424 PRINTS Disease resistance protein signature 215 230 - -
Amo05g3319 1424 MobiDBLite consensus disorder prediction 1093 1119 - -
Amo05g3319 1424 Gene3D - 12 176 IPR035897 -
Amo05g3319 1424 SMART till_3 15 155 IPR000157 GO:0007165
Amo05g3319 1424 SUPERFAMILY L domain-like 538 883 - -
Amo05g3319 1424 Gene3D - 177 346 IPR027417 -
Amo05g3319 1424 Coils Coil 1367 1401 - -
Amo05g3319 1424 Gene3D Ribonuclease Inhibitor 710 896 IPR032675 -
Amo05g3319 1424 SUPERFAMILY "Winged helix" DNA-binding domain 421 526 IPR036390 -
Amo05g3319 1424 Gene3D Ribonuclease Inhibitor 529 709 IPR032675 -
Amo05g3319 1424 Pfam TIR domain 16 184 IPR000157 GO:0007165
Amo05g3319 1424 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 1161 - -
Amo05g3319 1424 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1260 1398 - -
Amo05g3319 1424 Coils Coil 1325 1359 - -
Amo05g3319 1424 Pfam NB-ARC domain 198 428 IPR002182 GO:0043531
Amo05g3319 1424 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3319 Amo-Chr5 95479383 95484658 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3319 16 781 WRKY Transcription Factor Family AT4G12020 30.836 5.36e-87 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3319 - - ccaj:109810288 2097.78