Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3316 ATGAAGCACTTCAACTATTCAGTTGGAATGCCTTTAAACGGAGTGAGCCTGATGCAAATTAAGGGTCTTCCACTAGCATTAACAGTATTAGGTTCTGATATGTGTGGTCGAAGCATTCGCCATTGGGAATCTGCGTTGGATAAATACAAGAGAAGTCCTAATGGAAAGTTTGTTGATATTCATGAGTGCACTGAGCTGAAGAACTTAGCAAGTGTCCTAAAGTTGCCATCTTTAGGATGCATTGCTCTTAATGGTTGTTCTCAACTTGAGAAGTTTCCAGAATTGTTGGGAGAAATGGAAAATTTGAGAATTATTGAGGTGGAAGAGACTGCAATACAAGAATTGCCTTCTTGTATAATCAATTTCAGTAGCCTTGAGGTTTTAGTGCTGAAATGTTGCTCAAATCTAAAGGAACTTCCTATAAACATTGATATGTTGCCAAATCTTCAGTTACTTAATATTTCTGGCTGTCCACAACTTCAACTATTTATTAAGAAGCTTAGGAGGTTCAGCACACAGAATTGCTCAACTATTCTGTACAAATTCATCACCATAATGAATGAATAA 567 0.3686 MKHFNYSVGMPLNGVSLMQIKGLPLALTVLGSDMCGRSIRHWESALDKYKRSPNGKFVDIHECTELKNLASVLKLPSLGCIALNGCSQLEKFPELLGEMENLRIIEVEETAIQELPSCIINFSSLEVLVLKCCSNLKELPINIDMLPNLQLLNISGCPQLQLFIKKLRRFSTQNCSTILYKFITIMNE* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3316 188 PRINTS Disease resistance protein signature 20 34 - -
Amo05g3316 188 PRINTS Disease resistance protein signature 144 160 - -
Amo05g3316 188 PANTHER DISEASE RESISTANCE PROTEIN (NBS-LRR CLASS) FAMILY PROTEIN 58 169 - -
Amo05g3316 188 PANTHER LEUCINE-RICH REPEAT-CONTAINING 58 169 - -
Amo05g3316 188 Gene3D Ribonuclease Inhibitor 19 181 IPR032675 -
Amo05g3316 188 SUPERFAMILY L domain-like 50 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3316 Amo-Chr5 95448292 95448937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3316 57 169 WRKY Transcription Factor Family AT4G12020 39.823 1.73e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3316 - - lja:Lj0g3v0340619.1 184.882