Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3310 ATGGCTATCCGGCACGGTTTGTGGTTGGCATGGCAATCTGGTTACAGAAAGGTGGAATGTGAAAGTGAYTGCATGGTGGCTCTCAAGATTATSCATGACAATGCCGAAGRCTTTCCAGARTTWGMAWACATTGTTGAAGAAATTCATCAGTTWATGCTTCTTGAGTGGGAYGTCACTRTCTATCATATCATGAGGGAAGGAAATTCGTGTGCTGATTTTTTGGCAAAGATGGGTTCTTCTTCAAATTCTACGTTTTCTCTTATGATGAACCCTCCGCCGGAACTCACTGCCCTTCTTCTTGCCGACTCYAAGGGTGTTCTTTATTCTAGACCTAATGTAGTGGATGAAGTATCCCAAAAGCTAAATGTAGCTAGACACCCTGTTGGACTCCAAGCTCGTGTATCAGAAGTATACTCACTGTTAGAACCTGGATCTGATGATGTTAGAATGGTTGGAATTTATGGTATTGGTGGAATTGTAGCTTATGCAGAGGGTCTTCCACTAGCATTAACAGTATTAGGTTCTGATATGTGTGGTCGAAGCATTCGCCATTGGGAATCTGCGTTGGATAAATACAAGAGAAGTCCTAATGAGAAATTTCCAGAATTGTTGGGAGAAATGGAAAATTTGAGAATTATTGAGGTGGAAGAAACTGCAATACAAGAATTGCCTTCTTGTATCATCAATTTCAGTAGCCTTGAGGTTTTAGTGCTGAAATGTTGCTCAAATCTAAAGGAACTTCCTATAAACATTGATATGTTGCCAAATCTTCAGTTACTTGATATTTCTGGCTGTCCACAACTTCAACTATTTATAAAGAAGCTTAGGAGGTTCAGCACACAGAATTGCTCAACTATTCTATACAAATTCAGCACCATAATGAATGAATAA 891 0.3895 MAIRHGLWLAWQSGYRKVECESDCMVALKIXHDNAEXFPEXXXIVEEIHQXMLLEWDVTXYHIMREGNSCADFLAKMGSSSNSTFSLMMNPPPELTALLLADSKGVLYSRPNVVDEVSQKLNVARHPVGLQARVSEVYSLLEPGSDDVRMVGIYGIGGIVAYAEGLPLALTVLGSDMCGRSIRHWESALDKYKRSPNEKFPELLGEMENLRIIEVEETAIQELPSCIINFSSLEVLVLKCCSNLKELPINIDMLPNLQLLDISGCPQLQLFIKKLRRFSTQNCSTILYKFSTIMNE* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3310 296 Gene3D - 1 79 IPR036397 GO:0003676
Amo05g3310 296 PANTHER - 1 109 - -
Amo05g3310 296 SUPERFAMILY Ribonuclease H-like 1 82 IPR012337 -
Amo05g3310 296 PRINTS Disease resistance protein signature 252 268 - -
Amo05g3310 296 PRINTS Disease resistance protein signature 163 177 - -
Amo05g3310 296 CDD RNase_H_like 1 76 IPR044730 -
Amo05g3310 296 SUPERFAMILY RNI-like 199 271 - -
Amo05g3310 296 Pfam Reverse transcriptase-like 2 77 IPR002156 GO:0003676|GO:0004523
Amo05g3310 296 Gene3D Ribonuclease Inhibitor 189 292 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3310 Amo-Chr5 95368456 95369986 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3310 200 277 WRKY Transcription Factor Family AT4G12020 39.744 7.04e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3310 - - lja:Lj0g3v0340619.1 138.272