Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3287 GTTCCTCCTACACAATCCATTTTCTTGGAGAATAATCATTCCTTCATTTTGATGGAATTGTTCCGACTAGAAATGTGCTACCTAACTTTCAATACTGTAAATTCCTTCTCATTCTTATTCCATCTTATCATCATTTCATTCAATCATACTAAAAGTATAGCCTCAACAACAATCAGGTCTTATCCTATAGGCAAAGTTGGCTACATGGGTCATAACGCCGTAGTATCCTACTATCTTAACCCTTGTGTATTTCTTGAATTGCATTTGTTATTTTTCCTTTTGAGAGGCTATGAAATCATAGATGACATCAAAGAAGAGCTTGAAAGACAATGCCCTGGAGTTTCATGTGCTGATATTCTCGCTTTAGCTGCTAGAGATGCAGTTTTCTTTGCAGGGGGGCCAGTTTATGACATACCAAAGGGAAGAAAAGATGGAACAAGGTCCAAAATTGAGGATACCATTAATCTGCCATCTCCCAACTTCAATGCTTCTGATCTCATCAAGATGTTTGGCCAACATGGCTTTTCAGCACAAGAGATGGTGGCTCTCTCTGGGGCTCATACAATAGGAGTAGCTAGGTGTTCTTCTTTCAAGAACAGGCTAACAAAAGTGGATCCAAATTTGAACTCAGAATTTGCAAAGACACTGTCCAGAACATGCAGTGCCGGTGACAATGCTGAGCAGCCCTTCGATGAAACAAGGGATGATTTCGACAACTTGTACTTCGACGCTTTGGTCTCCGGCAATGGGGTTCTCACATCTGATCAAACATTGTTCACTAGTCCAAGAACTAGGAATTTTGTCAACTCTTATGCACAGAACCAAGCCTTGTTCTTCTTGGATTTCCAACAAGCCATGGTCAAAATGAGCTTGCTTGATATCAAAGAAGGTTCCAAGGGTCAAGTTAGAGATAACTGCCGCAAAATAAATTGA 933 0.403 VPPTQSIFLENNHSFILMELFRLEMCYLTFNTVNSFSFLFHLIIISFNHTKSIASTTIRSYPIGKVGYMGHNAVVSYYLNPCVFLELHLLFFLLRGYEIIDDIKEELERQCPGVSCADILALAARDAVFFAGGPVYDIPKGRKDGTRSKIEDTINLPSPNFNASDLIKMFGQHGFSAQEMVALSGAHTIGVARCSSFKNRLTKVDPNLNSEFAKTLSRTCSAGDNAEQPFDETRDDFDNLYFDALVSGNGVLTSDQTLFTSPRTRNFVNSYAQNQALFFLDFQQAMVKMSLLDIKEGSKGQVRDNCRKIN* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3287 310 Gene3D Peroxidase, domain 2 157 289 - -
Amo05g3287 310 CDD secretory_peroxidase 95 309 IPR033905 GO:0004601|GO:0042744
Amo05g3287 310 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g3287 310 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g3287 310 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g3287 310 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g3287 310 PRINTS Plant peroxidase signature 228 243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g3287 310 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g3287 310 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g3287 310 PRINTS Plant peroxidase signature 244 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g3287 310 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g3287 310 PRINTS Plant peroxidase signature 284 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g3287 310 Pfam Peroxidase 94 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g3287 310 PANTHER PEROXIDASE 47 94 308 - -
Amo05g3287 310 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Amo05g3287 310 ProSiteProfiles Plant heme peroxidase family profile. 94 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g3287 310 SUPERFAMILY Heme-dependent peroxidases 93 310 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo05g3287 310 PANTHER PEROXIDASE 25-RELATED 94 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g3287 310 Gene3D - 94 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3287 Amo-Chr5 95071207 95072750 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3287 94 310 Peroxidase AT4G33420 73.853 1.04e-112 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3287 K00430 - gmx:100809245 372.089