Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3270 ATGGTGTACAAAAGGCCATTGAAGTGTTTGAAGATAGTGATGGCTAATTTGGTGACAGTGTTTGTTGTGATGGGAATTATAGTGAGTGGTTTCAGAATTGGAGCAGATGGTTTGAACATGAATTACTATTTGTTTAGTTGCCCTTTTGTTGAATCTGTTGTTAAGGACATTGTCAATAGGGCATTGGAAGATGATCCTTCACTTGCTGCTCCTCTTCTTAGAATGCACTTCCATGATTGTTTCATTCAGGGATGTGATGGATCAATTTTGATTGATTCCACAAAGGGTAACAAAGCAGAAAAGGATTCACCAGCAAATTTGAGTTTGAGAGGCTATGAAATTATAGATGACATCAAAGAAGAGCTTGAAAGACAATGCCCTGGAGTAGTTTCATGTGCTGATATTCTTGCTTTAGCTGCTAGAGATGCAGTTTTCTTTGCACGGGGGCCAGTTTATGACATACCAAAGGGAAGAAAAGATGGAACAAGGTCCAAAATTGAGGATACCATTAATCTGCCATCTCCCAACTTCAATGCTTCTGATCTCATCAAGATGTTTGGCCAACATGGCTTTTCAGCACAAGAGATGGTGGCTCTCTCTGGGGCTCATACAATAGGAGTAGCTAGGTGTTCTTCTTTCAAGAACAGGCTAACAAAAGTGGATCCAAATTTGAACTCAGAATTTGCAAAGACACTGTCCAGAACATGCAGTGATGGTGACAATGCTGAGCAGCCCTTTGATGAAACAAGGAATGATTTCGACAACTTGTACTTCGACGCTTTGGTTTCCAGCAATGGGGTTCTCACATCTGATCAAACATTGTTCACTAGTCCAAAAACTAGGAACTTTGTCAACTCTTATGCACAGAACCAAGCCTTGTTCTTCTTGGATTTCCAACAAGCCATGATCAAAATGACCTTGCTTGATATCAAAGAAGGTTCCAAGGGTCAAGACATTATCAATAGGGCATTGGAAGATGATCCTTCACTTGCTGCTCCTCTTCTCAGAATGTACTTCCATGATTGTTTCATTCAGGGATGTGATGGATCAATTTTGATTGATTCCACAAAGGGTAACAAAGCAGAAAAGAATTCACCAGCAAATTTGAGTTTGAGAGGCTATGAAATCATTGATGACATCAAAGAAGAGCTTGAAAGACAATGCCCTGAAGTAGTTTCATGTGCTGATATTCTTGCTTTAGCTGCTAGGGATGCAGTTTTCTTTGCAGGGGGGCCAGTTTATGACATACCAAAGGGAAGAAAAGATGGAACAAGGTCCAAAATTGAGGATACCATTAATCTGCCATCTCCCAACTTCAATGCTTCTGATCTCATCAAGATGTTTGGCCAACATGGCTTTTCAGCACAAGAGATGGTGGCTCTCTCTGGGGCTCACACAATAGGAGTAGGTAGGTGTTCTTCTTTCAAGAACAGGCTAACAAAAGTAGATCCAAATTTGAACTCAGAATTTGCAAAGACACTCAGCCCTTCGATGAAACAAGGGATGATTTCGACAATTTGTGATCAAACATCGTTCACTAGTCCAAGAGCTAGGAATTTTGTCAACTCTTATGCACAGAACCAAGCCTTGTTCTTCTTGGATTTGCAACAAGCCATGGTCAAAATGAGCTTGCTTGATATCAAAGAAGGTTCCAAGGGTCAAATTAGAGATAACTGCCGCAAAATGAATTGA 1692 0.4054 MVYKRPLKCLKIVMANLVTVFVVMGIIVSGFRIGADGLNMNYYLFSCPFVESVVKDIVNRALEDDPSLAAPLLRMHFHDCFIQGCDGSILIDSTKGNKAEKDSPANLSLRGYEIIDDIKEELERQCPGVVSCADILALAARDAVFFARGPVYDIPKGRKDGTRSKIEDTINLPSPNFNASDLIKMFGQHGFSAQEMVALSGAHTIGVARCSSFKNRLTKVDPNLNSEFAKTLSRTCSDGDNAEQPFDETRNDFDNLYFDALVSSNGVLTSDQTLFTSPKTRNFVNSYAQNQALFFLDFQQAMIKMTLLDIKEGSKGQDIINRALEDDPSLAAPLLRMYFHDCFIQGCDGSILIDSTKGNKAEKNSPANLSLRGYEIIDDIKEELERQCPEVVSCADILALAARDAVFFAGGPVYDIPKGRKDGTRSKIEDTINLPSPNFNASDLIKMFGQHGFSAQEMVALSGAHTIGVGRCSSFKNRLTKVDPNLNSEFAKTLSPSMKQGMISTICDQTSFTSPRARNFVNSYAQNQALFFLDLQQAMVKMSLLDIKEGSKGQIRDNCRKMN* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3270 563 Gene3D Peroxidase, domain 2 499 542 - -
Amo05g3270 563 Gene3D Peroxidase, domain 2 174 306 - -
Amo05g3270 563 ProSiteProfiles Plant heme peroxidase family profile. 318 563 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 CDD secretory_peroxidase 317 561 IPR033905 GO:0004601|GO:0042744
Amo05g3270 563 CDD secretory_peroxidase 37 317 IPR033905 GO:0004601|GO:0042744
Amo05g3270 563 Gene3D Peroxidase, domain 2 445 498 - -
Amo05g3270 563 Gene3D - 41 317 - -
Amo05g3270 563 PRINTS Plant peroxidase signature 71 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 PRINTS Plant peroxidase signature 47 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 SUPERFAMILY Heme-dependent peroxidases 37 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 ProSitePatterns Peroxidases active site signature. 331 342 IPR019794 GO:0004601
Amo05g3270 563 PANTHER PEROXIDASE 25-RELATED 500 561 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 PANTHER PEROXIDASE 25-RELATED 318 500 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 Pfam Peroxidase 55 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 Pfam Peroxidase 320 524 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 ProSitePatterns Peroxidases proximal heme-ligand signature. 457 467 IPR019793 -
Amo05g3270 563 ProSitePatterns Peroxidases active site signature. 69 80 IPR019794 GO:0004601
Amo05g3270 563 PANTHER PEROXIDASE 25-RELATED 28 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 PANTHER PEROXIDASE 47 28 317 - -
Amo05g3270 563 SUPERFAMILY Heme-dependent peroxidases 318 563 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 ProSiteProfiles Plant heme peroxidase family profile. 37 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 Gene3D - 318 444 - -
Amo05g3270 563 PRINTS Haem peroxidase superfamily signature 69 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g3270 563 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Amo05g3270 563 PANTHER PEROXIDASE 47 318 500 - -
Amo05g3270 563 PANTHER PEROXIDASE 47 500 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3270 Amo-Chr5 94853831 94865902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3270 320 563 Peroxidase AT4G33420 61.993 1.18e-110 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3270 K00430 - gmx:100809245 520.776