Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3225 ATGACGTGGATCCTTCTGATGTGCGGAAGCAGACAGGGACTTATGGAGAAGCATTGGCTGTGCATGAGAACAAGTTCAAGTTCGAGGCTTAAGAGATGGAAAATGGCTTTGGAGAAAATAGCAGACTTGTCTGGTTATCATTTCAAACAAGGGGATGGATATGAACACAAGTTTGTTGCCAAGATTGTTGGACATGTATCAATAGAGATTAAACGTGCTACTTTACCTATTGTAGATCACCCAGTTGGATTGGATTCCCAAGTGGAAAAGGTAATTTCTCTTTTGAATGTTGGGTCTAGTGATGGAGTTTGCGTGCTCGGGATTCATGGAATTGGTGGAATAGGTAAAACAACACTTGTTGTGGCAGTGTATAATTGGCTTGTCAATCATTTTGCAGTTTTATGTTTTGAACATATATGTTTCCATGAAAATATAAGAGAGAATTCAAATAAATATGGATTAAAACATCTGCAGAAGACCCTTCTGTTTGAATTAGTTGGAGAAAATAAAGTTACATTGATGAGTTTTAGAGAAGGAATATCAATGTTAAAGCAAAAACTCCAACGAAAGAAAATTCTTTTGATTCTAGATGACATTGACCAACAAGAGCAATTAGATGCTCTAGCTGGAAATCTTGATTGGTTTAGTCCTGGTAGTAGAGTTATCATCACAACTCGGGACACGAGTTTGCTATCAAGGTATGAGGACAGAATAACATATGAGTCAGATAAGTTGAATGATAAAGATTCTCTAGAATTGCTCAGTTTCAAAGCTTTAAAAACTAACAAAGTTGATCGAAGTTACTTAGACATCTTGAGCAATGTGGTAACTTATGCTTCTGGCCTACCATTGGCTTTGGAAGTTATGGGATCCAACTTTCTGGGCAAAAGTATAGAACAGTGGAAATCTGCGCATTAG 918 0.3725 MTWILLMCGSRQGLMEKHWLCMRTSSSSRLKRWKMALEKIADLSGYHFKQGDGYEHKFVAKIVGHVSIEIKRATLPIVDHPVGLDSQVEKVISLLNVGSSDGVCVLGIHGIGGIGKTTLVVAVYNWLVNHFAVLCFEHICFHENIRENSNKYGLKHLQKTLLFELVGENKVTLMSFREGISMLKQKLQRKKILLILDDIDQQEQLDALAGNLDWFSPGSRVIITTRDTSLLSRYEDRITYESDKLNDKDSLELLSFKALKTNKVDRSYLDILSNVVTYASGLPLALEVMGSNFLGKSIEQWKSAH* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3225 305 Gene3D - 244 305 IPR042197 -
Amo05g3225 305 Pfam NB-ARC domain 86 303 IPR002182 GO:0043531
Amo05g3225 305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 304 IPR027417 -
Amo05g3225 305 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 304 IPR044974 GO:0006952
Amo05g3225 305 Gene3D - 69 240 IPR027417 -
Amo05g3225 305 Gene3D - 9 68 IPR035897 -
Amo05g3225 305 PRINTS Disease resistance protein signature 186 200 - -
Amo05g3225 305 PRINTS Disease resistance protein signature 105 120 - -
Amo05g3225 305 PRINTS Disease resistance protein signature 279 293 - -
Amo05g3225 305 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 28 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3225 Amo-Chr5 93997434 93999199 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3225 82 296 WRKY Transcription Factor Family AT5G45050 31.163 2.27e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3225 - - ahf:112747389 482.641