Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3210 ATGGAGATAGAGGCAAGTAAACCTTCGGGGAATAATAATAATAATAACAATGGAGGAGGGGTGGTTCCGGCGTTGAGTCCTCTGAGTGAGACTCTTTGGAGGGAGAAGACGGACACGGAGTTCATTGGAGACGTATCGGCCAGGCTGACGTGGAAGGATCTGACGGTTATGGTCACTCTCAGCAACGGAGAGACGCAAAATGTTCTAGAAGGTTTAACGGGTTATGCTGAGCCTGGAACCTTCACTGCACTCATGGGCCCCTCCGGCTCCGGAAAATCCACTCTCCTCGACGCTCTTTCCAGTCGCCTTGCCGCCAATGCCTTCCTCTCCGGCACCATCCTCCTCAACGGTCGCAAAGCCAAGCTCTCCTTCGGCACCGCCGCTTACGTGACACAAGATGACAACTTAATTGGGACCCTAACAGTAAGAGAGACGATATCATATTCAGCAAGGCTGCGGTTGCCAGATAAGATGGCAAGGTCGGACAAAAGGGCATTGGTTGAGAGCACGATAGTGGCGATGGGGCTTCAAGATTGTGCTGACACAGTGATAGGGAACTGGCACCTGCGTGGGATCAGTGGTGGGGAGAAGAGAAGGGTTAGCATTGCATTGGAAATATTGATGAGGCCTAGGTTGCTCTTCCTTGATGAACCTACTAGTGGCTTAGACAGTGCTTCGGCTTTCTTTGTGACTCAGACACTGCGTGCATTGGCAAGAGATGGAAGAACAGTAATAGCTTCCATTCATCAACCAAGCAGTGAAGTGTTTGAACTCTTTGATCAATTGTACTTGCTCTCTGGTGGCAAAACTGTTTACTTTGGCCAAGCTTCTGAGGCATACGAGTTCTTTGCACAAGCTGGTTTTCCATGCCCTGCATTGAGGAATCCATCAGATCATTTCCTTAGATGCATCAACTCTGACTTTGACAAAGTCAAATCAACTCTTAAAGGGTCCATGAAACTCAGGTTTGAGGGAAGTGATGATCCCTTGGATAAGATCACTACTGCTGAAGCTATCAGGACTCTTATTGATTACTACCGCACTTCTCAGCATTCTTATGCTGCAATACAGAAAGTGGATGAGATATCCAAAGTTAAAGGAACAGTGCTTGACGCAGGAGGAAGCCAAGCTAGCTTCTTAATGCAGTCTTACACTTTAACAAAGCGCTCCTTCATCAACATGTCTAGGGACTTTGGTTACTATTGGCTTAGGCTTGTGATCTACATTGTGGTCACTATCTGCATTGGAACCATTTATTTGAACGTGGGAACAGGCTACAATTCAATTCTGGCTAGAGGCTCATGTGCATCATTTGTGTTTGGTTTTGTCACATTCATGTCAATTGGTGGATTCCCTTCATTTGTTGAAGACATGAAGGTTTTCCAAAGGGAAAGACTGAATGGGCACTATGGTGTGACTGCATTTGTGATAAGCAACACATTATCTGCAATGCCATTCCTGATATTAATAACTTTTCTGTCTGGAACAATCTGTTACTTCATGGTTAGGCTTCACCCTGGTTTTTGGCATTACCTCTTCTTTGTGCTGTGCCTTTATGCAAGTGTCACAGTTGTTGAGAGCTTAATGATGGCAATAGCTAGCATTGTCCCCAACTTCCTCATGGGCATCATAATTGGAGCAGGGATTCAGGGAATATTCATGCTGGTGTCTGGCTACTTTAGGCTTCCACATGATATTCCAAAGCCAGTCTGGCGCTATCCAATGTCATACATCAGTTTCCATTTTTGGGCACTACAAGGACAATACCAGAATGATCTAACTGGCTTGATATTCGACAACCAGACGCCGGATCTTCCAAAGATACCGGGCGAATACATCCTAGAGAATGTTTTCCAGATTGATGTGAACAGATCAAAGTGGATAGACCTAAGTGTGATCTTCAGCATGATTATAATCTACCGCATAATTTTCTTCATAATGATCAAGATCAATGAGGATGTGACACCATGGGTTAGAGGGTACATTGCTAGGAGAAGGATGCAGCAGAAGAGTGGAACTCAGAACACAACTATTGCACCTGATGTTCTTGCTCACTCACCATCTCTTAGAGCTTATGTTTCTACTCAAAGAAGAAATGGCACTTCCAAAAGTTGA 2115 0.4511 MEIEASKPSGNNNNNNNGGGVVPALSPLSETLWREKTDTEFIGDVSARLTWKDLTVMVTLSNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMARSDKRALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKSTLKGSMKLRFEGSDDPLDKITTAEAIRTLIDYYRTSQHSYAAIQKVDEISKVKGTVLDAGGSQASFLMQSYTLTKRSFINMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTAFVISNTLSAMPFLILITFLSGTICYFMVRLHPGFWHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPVWRYPMSYISFHFWALQGQYQNDLTGLIFDNQTPDLPKIPGEYILENVFQIDVNRSKWIDLSVIFSMIIIYRIIFFIMIKINEDVTPWVRGYIARRRMQQKSGTQNTTIAPDVLAHSPSLRAYVSTQRRNGTSKS* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3210 704 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 49 292 IPR003439 GO:0005524
Amo05g3210 704 CDD ABCG_EPDR 46 274 - -
Amo05g3210 704 Gene3D - 43 287 IPR027417 -
Amo05g3210 704 PANTHER OS04G0528300 PROTEIN 15 694 - -
Amo05g3210 704 MobiDBLite consensus disorder prediction 1 22 - -
Amo05g3210 704 Pfam ABC-2 type transporter 382 588 IPR013525 GO:0016020|GO:0140359
Amo05g3210 704 Pfam ABC transporter 71 220 IPR003439 GO:0005524
Amo05g3210 704 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 15 694 - -
Amo05g3210 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 286 IPR027417 -
Amo05g3210 704 MobiDBLite consensus disorder prediction 1 23 - -
Amo05g3210 704 ProSitePatterns ABC transporters family signature. 192 206 IPR017871 GO:0005524
Amo05g3210 704 SMART AAA_5 78 249 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3210 Amo-Chr5 93690596 93696143 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3210 79 253 Calmodulin-binding Proteins AT2G36910 33.871 1.22e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3210 K05681 - gmx:100803731 1267.29