Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3194 ATGGAATCGGCTGTGAGTTGCTCTGAGTTGATTGAAGATACCGTTTTAGAGACTCATGTTACCACATTTACTCCAACGGTTTGTTCTGGAAGCTGTGCTGATATTGGACCAAGGGGATCCATGGATGATGAGCACATCCAAATAGATGATCTAGCTGCCCACCTTGGATTTGTGTTCAAATACCCTATACGGAGTGCATTTTATGCAGTTTTTGATGGGCATGAGGGCCTAATGCAGCTGCTTTCATTAAGAGGAATGCAATTAGATTATTTTTTGAAGACACCAATATGCTGCAATCATATGATACAGATGCACTTTCCCTAA 324 0.4136 MESAVSCSELIEDTVLETHVTTFTPTVCSGSCADIGPRGSMDDEHIQIDDLAAHLGFVFKYPIRSAFYAVFDGHEGLMQLLSLRGMQLDYFLKTPICCNHMIQMHFP* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3194 107 PANTHER PROTEIN PHOSPHATASE 2C 3 76 IPR015655 GO:0004722|GO:0006470
Amo05g3194 107 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 3 76 - -
Amo05g3194 107 SUPERFAMILY PP2C-like 18 93 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3194 Amo-Chr5 93477994 93478932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3194 1 76 PP2C-type Phosphatase Gene Family AT3G17250 53.846 2.86e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3194 K14803 - gmx:100798957 124.405