Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3173 ATGACACTGAACCTTGTTCTTCTGATGGAAATGGTGGCCACCAACATCCTCTCACTCTATCACCTCTCTTCAACTCTCCAATCGCCAAAATCATCCCCTCTCCCGCCGCCGTTGCTTCTCTCAAACCGCGCCGCACAAACCCTCATCCCCTCTCCCTCAAGCCCTTTCCCTTCTTCACTCCCCGATTTCTCTGCTTCAACCCTTCCTCCGATTCGTCCAAGTTCACAACCTACCGGTGTTCGACGGAGTGGTGAACCTTGTGCGGTGCGGGTATTCTCCGTCGCACTGGACGTCGCGAGAGGGTTACAGTTTCTTCACTCCTGTGACCCACCGGTGATTCACAGCGATATCAAGCCCAATTTTTCCGTTGAGTTTGACGGAGATATTTGCACAGAAAAACTAATCCGTTCAACTTTTAAAAAAGTGAGAGACTTAAAAATATTTTTTAATGGTTAG 456 0.489 MTLNLVLLMEMVATNILSLYHLSSTLQSPKSSPLPPPLLLSNRAAQTLIPSPSSPFPSSLPDFSASTLPPIRPSSQPTGVRRSGEPCAVRVFSVALDVARGLQFLHSCDPPVIHSDIKPNFSVEFDGDICTEKLIRSTFKKVRDLKIFFNG* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3173 151 Gene3D Transferase(Phosphotransferase) domain 1 78 120 - -
Amo05g3173 151 SUPERFAMILY Protein kinase-like (PK-like) 90 120 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3173 Amo-Chr5 93228689 93230078 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3173 90 118 MAP Kinase Kinase Kinase AT3G06640 55.172 4.89e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3173 - - ahf:114927774 62.3882