Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3169 ATGCATATAGTATCTCCTCATTCCACACCCTTACTACTTCCATTCTTCAAAACTTGTACACAAACARAACCTTCKTTCCTTCACCTGAGTCTGTTAGAAGCTTCCACAAACATGGCTTCAATTGGGGTGTCTGAGATGCTTGGAAACCCCATCAAGTTGAGTGGTGCAGCAAGGTCAGCACCATCAGCTTCTAGCCCTGCCACCTTCAAGACTGTGGCTCTCTTTGGTAAGAAGAAGGCAGCACCACCTCCTCCTTCAAAGAAAGCTGCTGCTGCTGTCACTCCTGCCAATGATGAACTCGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCAGAGGGTCTCTTGGACCGATCCGAGATCCCACCATACTTGACTGGAGAAGTGCCCGGAGACTATGGTTATGATCCTTTTGGTCTCAGCAAGAAGCCAGAGGACTTTGCCAAATATCAGGCATACGAGTTGATTCACGCAAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTCAACAAATTCGGAGCTAACTGCGGTCCTGAGGCTGTTTGGTTCAAGACCGGAGCTCTTCTTCTCGATGGTGGAACGCTMAACTACTTTGGGAAGCCGATCCCCATCAACCTCATTGTTGCTGTCGTCGCTGAGATTGTACTTTTGGGTGGTGCAGAGTACTACAGAATTATCAATGGCCTGGATTTGGAAGATAAGCTTCATCCAGGTGGTCCATTCGACCCGTTGGGACTTGCAAAGGATCCGGACCAAGCTGCATTGTTGAAGGTGAAGGAGATCAAGAATGGAAGGCTTGCCATGTTTGCCATGCTTGGTTTCTACTTCCAAGCTTATGTCACCGGAGAAGGCCCCGTCGAGAACCTTGCAAAGCATCTCAGTGACCCCTTTGGCAACAACTTGCTCACTGTCATTGCTGGTTCTGCTGAGAGAGTTCCAACTCTTTGA 966 0.4886 MHIVSPHSTPLLLPFFKTCTQTXPSFLHLSLLEASTNMASIGVSEMLGNPIKLSGAARSAPSASSPATFKTVALFGKKKAAPPPPSKKAAAAVTPANDELAKWYGPDRRIFLPEGLLDRSEIPPYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVVAEIVLLGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGSAERVPTL* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3169 321 Pfam Chlorophyll A-B binding protein 123 284 IPR022796 -
Amo05g3169 321 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 32 321 - -
Amo05g3169 321 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 32 321 IPR001344 GO:0009765|GO:0016020
Amo05g3169 321 SUPERFAMILY Chlorophyll a-b binding protein 102 312 - -
Amo05g3169 321 Gene3D Chlorophyll a/b binding protein domain 110 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3169 Amo-Chr5 93157215 93159680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3169 38 321 Chloroplast and Mitochondria Gene Families AT4G10340 80.351 3.90e-152 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3169 K08916 - gmx:100806585 497.278