Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3163 ATGGAGTGCAATAAGGACGAGGCAAACAGAGCTAAAGAAATTGCAGAGAGGAAGTTTAATGCAAAGGATACTTTGGGTGCAAAGAAATTTGCTTTGAAAGCTCAAAATTTGTTTCCAGATCTTGAGGGCATTCCTCAGATGTTAGCAACACTTGATGTWTATATTTCTGCCGAGCGTAAAATAAATGGAGAAGCAGATTGGTATGGTGTACTCGGTGTTGACCCATTTGCCGATGATGATACAGTTAGGAAACAGTACAGGAAGCTAGCTCTTATGCTTCACCCTGATAAGAACAAGTCTGTTGGTGCAGATGGGGCCTTTAAACTTATTTCAGAGGCGTGGAGTTTACTATCAGATAAGTCTAGAAGGGCAGCATATGATGAGAAGAGAAAAACAAAAGCCGGGAAAGTTTCATCGAAGTTTGGAGGTTCATCAGCAGCAACAGGGGCTAATGGCAGTTACAATTTTGCTAAGACTGCCCCTTCAAGTGCAAGGACTCAGAAGAATACTYCGAAAGAACACTCCTCATCTTCTACCCATAAGCCAAAAGGAAATACATTTTGGACMGTTTGCCACAGATGCAAAATGCAGTATGAGTATCTACGAGTCTATCTTAACCTTAAACTCTTGTGTCCCAATTGCCATGAGGCATTTTTGGCTGTAGAAACTGCTCCTCCACCTTCAAGCGGTATTAGACCTGCAGCTTCATGGGACTTTTCACATCAGAAGAATCGTCAAGGACCTAATAAAAGCAAATCTCATYCTGGAAAGAACATGGCAYCRCCAAACGTCGGGGCGGGGAAAAACCATAGCAATGCTGATTTCCAGTGGGCTCCATTCTCAAAAACATCTGGTGTTTCTAATGTTGCTCAAGCTGCAAGTGTTGTTCAGCAGGCCTATGATAAGGTGAAGCGAGAACGTGAGGAGGCACAAGCAGCTACCAAAAGGGAAGAGGCCTTAAGAAGGAAGCAGCATGGTTCTAAAAAGGGTTACTTCAATTCTGGTAAGAGAAAAAGGGGGGGCATGGAGGATGTCAATGGTAAGGAACCTGTAAATCGAATGGGAGTGGGAAATGGAGCAGTAGGAGCATATGCAAGAGATTTTTCCCCAGCAGAACTGCAGGATATTCTTATGGATAAAGCTAGAAAAGAAATTAGCGATAAACTCAGGGAAATTCGGTCAAATACTTTTGATAGTTTAGCTAAAGGGTGTGAGGATGGCTTCAAGAAAGCAAATGAGCAAGGTGAAAATTTTTTAGGTAACCCTGATTTGTGTACTGAAAGCAACATTGCGAAGTCAGAAGACAGAGAGAGTGGAGCCCAAGTCCTCGAGTCATTTGCAGGTACTACTACTAGTACTACCATTGCTAAAATTTTGGAAACAATGCWAATAGATGTCCCAGATCCTGATTTTCTTGATTTTGACAAGGATCGAACGGAAGGATCTTTTGGTGAAAATCAAGTATGGGCTTTGTATGACAATGATGATGGGATGCCYCGGTATTATGCGAAGATCCACAGTGTGGTTTCGCTAAATCCATTCGCGTTGCGAATCTCTTGGCTTAACTCAAACACCAATGGTGAACTGCCCCCCCTGAATTGGGTMGCTTCAGGCSTTTCAAAAACTTGTGGGGATTTCAGAAGAGGCAGACATGAAATCTGTAACAACATCAATTTCTTTTCTCACAAGGTTAGGTGGAGAAAAGGTATTCATGGTGCCATCTGTATATACCCCAGGAAAGGGGATGTTTGGGCCCTTTATAGGAGTTGGTCTCCTGAATGGAATGAGCTGACATCCGACGAGGTTATACGCAAGTTTGACATGGTTGAAGTACTCGAGGATTTTAATGAAGAGTGCGGTGTAGTTGTTATTCCTCTGCTCAAAGTGGCTGGGTTCAGGGCGGTATTTCGTCACCACTCAGATCCAAAYGAAATCAGGATAATCCYGCGGGAAGAGATGTATCAGTTCTCGCATCAGGTCCCTTCGTATTTTCTAACTGGTCAAGAAGCTCCAAATGCCCCAAAGGGTTGCAGGGTGCTGGACCCAGCTGCTATTCCATCAGAATTTCTCCAGGTAATACAAACTGTGAAGGAGGAAGATGTGGTGGATAATGAGGATTGTATAATGACAGAAGCCGCAAGCAACAATGCGAAAGAAGATAATCGCGAGAAAATGATCACCGATGCGAGTAAACCCGGGGGAAATGATGAAGATATTCCGGAAATGAAAACTTTGAAAGTGGACAATGAGGGGAACAGTATAGAGGTAACAGCAAGTGAAAACATGAAAGAAGATAACTGTGAGGAAATGATCACTGATATGAGCAAAGTTGGGGAAGAAAGGGAWGGAAATTATGAAGATACAGAAGAAATGGAAACTTTGAAGGAAGACAAATAG 2397 0.4268 MECNKDEANRAKEIAERKFNAKDTLGAKKFALKAQNLFPDLEGIPQMLATLDVYISAERKINGEADWYGVLGVDPFADDDTVRKQYRKLALMLHPDKNKSVGADGAFKLISEAWSLLSDKSRRAAYDEKRKTKAGKVSSKFGGSSAATGANGSYNFAKTAPSSARTQKNTXKEHSSSSTHKPKGNTFWTVCHRCKMQYEYLRVYLNLKLLCPNCHEAFLAVETAPPPSSGIRPAASWDFSHQKNRQGPNKSKSHXGKNMAXPNVGAGKNHSNADFQWAPFSKTSGVSNVAQAASVVQQAYDKVKREREEAQAATKREEALRRKQHGSKKGYFNSGKRKRGGMEDVNGKEPVNRMGVGNGAVGAYARDFSPAELQDILMDKARKEISDKLREIRSNTFDSLAKGCEDGFKKANEQGENFLGNPDLCTESNIAKSEDRESGAQVLESFAGTTTSTTIAKILETMXIDVPDPDFLDFDKDRTEGSFGENQVWALYDNDDGMPRYYAKIHSVVSLNPFALRISWLNSNTNGELPPLNWVASGXSKTCGDFRRGRHEICNNINFFSHKVRWRKGIHGAICIYPRKGDVWALYRSWSPEWNELTSDEVIRKFDMVEVLEDFNEECGVVVIPLLKVAGFRAVFRHHSDPNEIRIIXREEMYQFSHQVPSYFLTGQEAPNAPKGCRVLDPAAIPSEFLQVIQTVKEEDVVDNEDCIMTEAASNNAKEDNREKMITDASKPGGNDEDIPEMKTLKVDNEGNSIEVTASENMKEDNCEEMITDMSKVGEERXGNYEDTEEMETLKEDK* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3163 798 MobiDBLite consensus disorder prediction 772 798 - -
Amo05g3163 798 PRINTS DnaJ domain signature 86 101 IPR001623 -
Amo05g3163 798 PRINTS DnaJ domain signature 102 122 IPR001623 -
Amo05g3163 798 PRINTS DnaJ domain signature 68 86 IPR001623 -
Amo05g3163 798 MobiDBLite consensus disorder prediction 307 351 - -
Amo05g3163 798 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Amo05g3163 798 MobiDBLite consensus disorder prediction 152 173 - -
Amo05g3163 798 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Amo05g3163 798 Gene3D DnaJ domain 63 181 IPR036869 -
Amo05g3163 798 MobiDBLite consensus disorder prediction 239 253 - -
Amo05g3163 798 SMART dnaj_3 65 122 IPR001623 -
Amo05g3163 798 Pfam Domain of unknown function (DUF3444) 462 669 IPR024593 -
Amo05g3163 798 SUPERFAMILY Chaperone J-domain 59 126 IPR036869 -
Amo05g3163 798 CDD DnaJ 66 119 IPR001623 -
Amo05g3163 798 Coils Coil 293 323 - -
Amo05g3163 798 PANTHER BNAC03G44070D PROTEIN 1 691 - -
Amo05g3163 798 MobiDBLite consensus disorder prediction 152 182 - -
Amo05g3163 798 Pfam DnaJ domain 66 127 IPR001623 -
Amo05g3163 798 MobiDBLite consensus disorder prediction 307 325 - -
Amo05g3163 798 MobiDBLite consensus disorder prediction 225 276 - -
Amo05g3163 798 PANTHER BNAA04G14940D PROTEIN 1 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3163 Amo-Chr5 93125109 93129372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3163 4 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.468 4.66e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3163 - - ahf:112751648 1573.53