Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3161 ATGAAAACCAGCTTAGAGTATCTCTCCACTTTGTCTGCTAATGATGGTTTATCAGGAGCAATGAGAGCATTGATATCTGAAGCTTCAACTGTGTTTGCACATTGTAGTAGTAGCTACATTGAAGCAAACATGAAAGTTGAGTCCACTGCTTCAGAACTGTTGAGAGCTGATAACTTAAAATCAGACCTTGAAAATAACAAGAATCAGTTCAATGATACGGTGGAGACCTTGGAAAGAGCTGYGGCAAAGTTGGCACGTTTGGAGGAAATGAAAGAGGAGCTAGAAAAGCAAATCAGAACTACTAATGCTAACATCATGGCTTGTCGAAAAGAACAGAACACGACTCGAAAGAGAAAAAGAGATGTCTACTACCACGTTTGCAACATGAGCATGACTTGGCAAAGGAAAACCAGGAAGAAATCAAAGCTGAATGGTCAGAGCTTGGAGAAAAATTTAAAAAGATTGTTGCCACGCGTTTTTCTCTTCAGTGCAAGTCAATTGAATGATAAAGATTCTCTAGAATTGCTCAGTTTCAAAGCTTTAAAAACTAACAAAGTTGATCGAAGTTACTTAGACATCTTGAGCAGTGTGGTAACTTATGCTTCTGGCCTACCATTGGCTTTGGAAGTTATGGGATCCAACTTTCTGGGCAAAAATCAATACAGAAGAATTCCCAATAAAAAGATACAAAATGTGCTTAAGGTAAGCTTTGATGGATTGGAGGAATTTGAGAAGGAAATTTTTCTTGATATTGCTTGTTGTTTCAATGGATGTGAATTGAAAGATGTCAAAAGGATACTTTGTGCTCATTATAATGTCGACTCCTTGGAATACGGACTTAAAGTGTTGGTTGAAAAATCACTAATAAAAATGGATGCATATCGTGGAATAATCTTGCATGCACTCATTCAAGACATGGGTAGAGACATTGTTCATCAAGAATCACCAAAAAAGCCTGGGAAGCATAGTCGATTATGGATCCTTGAAGATATAGTTCAAGGATCTGACAAAATTGAAATGATACATATGGATTTTCCCAAGTTTGAAAAAGTAATAAGATGGGATGGAGAGGCTTTCAAGAAAATGAGAAATCTCAAAACACTGTTTATTAGACATACTTATTTTTCCCAAGGTCCCAAGTATCTTCCAAATTGGTTAAGAGTGTTGAATTGGGAGGAATATCCTTCACCTTGTTTACCACTTGATTTTCATCCGGAGGGACTTGTCATATTCCAATTATCCGGCAAGAGTATACAATCAGTTAGGTTTCTTGAAAAGCAAAAGGCAAGTCTAAAATTCTTTCATCCAAAACCTTTACATATGACAATAAAAATCTTTAAGTACATGAGCTTGACGGTCATAAATCTTGATGATTCTAATGTAGAAGAGATACCTGATATATCCGGAGTCCCAAATTTAGTAAACCTATCATTGAATATGTGCTTGAATTTAATTAAAATTGACGAATCAATTGTATTCTTAGACAGACTTAGCGTATTGAGTGCTCAAGGTTGCAGGAGGCTTAAGAGATTTCCATCTATCAAGTTGACCAATCTTGTACATCTCTGTCTTTCAGGATGCTCTAGATATACTAACAATTTTGAGAAAGTGACTTCTGCGAGGTCTGAAGTAGATGTTGAAGAAGAACAAGGGAGTCCAATGGCACCTTTGGAGGCAAAACATTCTGCCTGCAAACTACCAGATTTGCTCCATGAATCTTTTACAACTTATCTTACCTGGTTTCGCAATGTGGAAGATTTAGACCTGTCAGAGCATAATTTCACAGTTCTTGATGAAAGCCTCAAAGAACTTTGCTCCTTGAGGTCACTTAGTTTGAATGGCTGCAGAGAACTTCGAGAAATTAAAGGGATTCCACCAAACATAAAGTATTTCTCTGCAAGAAACTGCATATCCTTGACTTACWCCAGCAAAAACATGTTACTTAACAAGGAATTGCATGAGGATGGAGCCAAGGATTTTGTTCTTCCCAAGAGTAGCATTCCAAAGTGGGTGGAGCATAGTAGCAACAATGATTCAATTTCTTTCTGGTTTCGCAACAAATTTATCATCAACAGCAGCAGAGGTCAAGCGGAACATCTTGAATCAGTGGAGACATCCAATCAATTAGTGGATCATTATATTTATTACTGA 2151 0.3715 MKTSLEYLSTLSANDGLSGAMRALISEASTVFAHCSSSYIEANMKVESTASELLRADNLKSDLENNKNQFNDTVETLERAXAKLARLEEMKEELEKQIRTTNANIMACRKEQNTTRKRKRDVYYHVCNMSMTWQRKTRKKSKLNGQSLEKNLKRLLPRVFLFSASQLNDKDSLELLSFKALKTNKVDRSYLDILSSVVTYASGLPLALEVMGSNFLGKNQYRRIPNKKIQNVLKVSFDGLEEFEKEIFLDIACCFNGCELKDVKRILCAHYNVDSLEYGLKVLVEKSLIKMDAYRGIILHALIQDMGRDIVHQESPKKPGKHSRLWILEDIVQGSDKIEMIHMDFPKFEKVIRWDGEAFKKMRNLKTLFIRHTYFSQGPKYLPNWLRVLNWEEYPSPCLPLDFHPEGLVIFQLSGKSIQSVRFLEKQKASLKFFHPKPLHMTIKIFKYMSLTVINLDDSNVEEIPDISGVPNLVNLSLNMCLNLIKIDESIVFLDRLSVLSAQGCRRLKRFPSIKLTNLVHLCLSGCSRYTNNFEKVTSARSEVDVEEEQGSPMAPLEAKHSACKLPDLLHESFTTYLTWFRNVEDLDLSEHNFTVLDESLKELCSLRSLSLNGCRELREIKGIPPNIKYFSARNCISLTYXSKNMLLNKELHEDGAKDFVLPKSSIPKWVEHSSNNDSISFWFRNKFIINSSRGQAEHLESVETSNQLVDHYIYY* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3161 716 Gene3D - 166 241 IPR042197 -
Amo05g3161 716 SUPERFAMILY "Winged helix" DNA-binding domain 227 333 IPR036390 -
Amo05g3161 716 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 163 699 IPR044974 GO:0006952
Amo05g3161 716 Coils Coil 60 80 - -
Amo05g3161 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 251 IPR027417 -
Amo05g3161 716 SUPERFAMILY L domain-like 349 644 - -
Amo05g3161 716 PANTHER ARCHAEAL ATPASE 163 699 - -
Amo05g3161 716 PRINTS Disease resistance protein signature 201 215 - -
Amo05g3161 716 PRINTS Disease resistance protein signature 602 618 - -
Amo05g3161 716 Coils Coil 82 111 - -
Amo05g3161 716 Gene3D Ribonuclease Inhibitor 561 702 IPR032675 -
Amo05g3161 716 Gene3D Ribonuclease Inhibitor 333 546 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3161 Amo-Chr5 93103758 93106776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3161 147 639 WRKY Transcription Factor Family AT5G45050 26.702 1.47e-31 130