Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3130 ATGATCTCATTTATTAGGTTCCGGAACTGGTACTCTGCTTTCGTCGGATTGGCGTCGACGTCAACTGAGGAGAGGGCGAACGCTAAAGTGATGTGCGTCGGATTAGGTACAAATCACCTCCCTCCGACTCCGACAGTGCATTTTTTTTCCGCCGAAGCTCAACCTCTGCTTGTCATCAAGGATGATGTGAAGAATGATTCTGATAATGATTTGGGTGATGATTTCGATTATCAACCGAATGCAGAAGACAATGCTGAAGACGACGATGTGGATTCGCTGGATTCTACTAGCAAGAGTGAAGAAGTTTGTGGGGTAAAAAGAATAGCAGATCTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAGGCCTGCCAGTTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTGGTTAGGGATAATCAAGGTMGAATTATTAGCAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGAAATATGAGGTATCTTGATATGGATGATAGATCAAGGGAGGCAAGGTCGCTAACGCGAACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTACGGCTGYGGTAGATGGAAGGTATCATGTTTTGTKGAATCTCACAACCACGATCTGACGCCACCCCAATTTGCGCATCTGGTACCGGCCAATCGTCGTCTCACTGTGAGTGATAGAGTCCAA 720 0.4583 MISFIRFRNWYSAFVGLASTSTEERANAKVMCVGLGTNHLPPTPTVHFFSAEAQPLLVIKDDVKNDSDNDLGDDFDYQPNAEDNAEDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNAYSCWHGFVMRKDDVVRDNQGRIISRQLVCNKEGWRNMRYLDMDDRSREARSLTRTKCPARLRVKLDYGCGRWKVSCFVESHNHDLTPPQFAHLVPANRRLTVSDRVQ 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3130 240 Pfam FAR1 DNA-binding domain 129 219 IPR004330 -
Amo05g3130 240 MobiDBLite consensus disorder prediction 72 90 - -
Amo05g3130 240 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 79 222 - -
Amo05g3130 240 MobiDBLite consensus disorder prediction 70 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3130 Amo-Chr5 92787331 92789419 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g3130 FAR1 2.3e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3130 - - adu:107460934 347.821