Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3110 ATGGAGTACTTTAATTTTGTAGCTTCGAAGAGATTAGTCGCCGGAAACACCTTTGTGTTTTCGAGAGGACACAACGGAGAGTTACATGTTGGACTGAGGCATAATACTCCCCAGCCAAGCAGCATGCCTTCATCTGTGATTTCCAGTCAGAGCATGCATCTTGGAGTACTCGCAACTGCATCTCATGCTGTTGCAACTCAGACTCTTTTTGTTGTATATTACAAGCCAAGAAGTTTATTTATATAA 246 0.4187 MEYFNFVASKRLVAGNTFVFSRGHNGELHVGLRHNTPQPSSMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRSLFI* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3110 81 PANTHER AUXIN RESPONSE FACTOR 9 5 78 - -
Amo05g3110 81 SUPERFAMILY DNA-binding pseudobarrel domain 6 63 IPR015300 -
Amo05g3110 81 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 5 78 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3110 Amo-Chr5 92314576 92315236 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3110 6 81 B3 DNA Binding Superfamily AT3G61830 71.429 2.78e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3110 K14486 - oeu:111381921 115.931