Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3096 ATGTACCGTAGAATCAACACCCGACCATTATACGTGGCTGACATAGAGGACCAGGAGAACGAGCCCGAGCCCGCATCAGAAGCCGGGCCTGCTTCTCCTTCCTCAGGTGAAATAGACATGTCTCGGAGAGAGGCTCGGAGGGAGATGAAGAAGAGAGTGGTCACAATACCGATCGGTGACGTGGACGGATCTAAGAGCAAAGGAGAATCATATCCACCGTCCGATTCATGGGCCTGGAGGAAGTACGGCCAGAAGCCCATCAAAGGCTCACCTTACCCAAGTGTTGCGGCGGTTGTCGGTGGTGCCGGCGAAGAGAAACATTTTGTGCAGGCGGCTGAGCTAAAATGCGCCATGTGTGTTGTGGTGGTGGGTAGTTAG 378 0.545 MYRRINTRPLYVADIEDQENEPEPASEAGPASPSSGEIDMSRREARREMKKRVVTIPIGDVDGSKSKGESYPPSDSWAWRKYGQKPIKGSPYPSVAAVVGGAGEEKHFVQAAELKCAMCVVVVGS* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3096 125 PANTHER OS01G0750100 PROTEIN 22 93 - -
Amo05g3096 125 MobiDBLite consensus disorder prediction 1 78 - -
Amo05g3096 125 Pfam WRKY DNA -binding domain 75 93 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo05g3096 125 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 22 93 IPR044810 GO:0003700
Amo05g3096 125 SMART WRKY_cls 73 118 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo05g3096 125 Gene3D WRKY domain 47 118 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo05g3096 125 ProSiteProfiles WRKY domain profile. 74 93 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo05g3096 125 MobiDBLite consensus disorder prediction 39 55 - -
Amo05g3096 125 SUPERFAMILY WRKY DNA-binding domain 69 94 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3096 Amo-Chr5 91859971 91861080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3096 16 93 WRKY Transcription Factor Family AT3G58710 60.494 2.15e-25 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo05g3096 WRKY 1.5e-05 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3096 - - ahf:112707218 149.828