Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3074 ATGTCTTCTGGTCTGTATTCATTTGAAACCACTTTCCAAGCACATTCAAGCTCAGACATGGTCACTGCTGATGGAGGAGACCTTGCTTTTCTCACTGACCCTTTTCCTTTCTTCGAAAACAGCACTACTAATAATGATATTGGTCAACACTGTTCGAGCAACCAAAGCATGTTCGATGAGGCTCTTTCTTCTTCTTCTGTTGACCCTTTTTCATCTTGCTTCTTTTCTTTCTCTCCTCCAAGTATTCACTTAGAAAACCTTAGCCTTCAGACCAACAACAAGAACAACCGTGTTGATCCCAATTTGGAGAGTGACTTTGCAAGTTTCTCATCGGGTTTTGATGTGACACAAGTAGTGAAGAGTGAGGAGTGCCAAATCGCTGTTGAATTTGATTATGGATATAATAATCATAATCACCAACACTTTTTTCCCCACAGTTATAGCGGTGCTGAGAATGTGGCAAAATACATGCAGAGGAGTTTCAGCAGCAACTCCTTTCATGGCAAACCTGGGAATTTTCTGTTCCAAAATAATCACTCTGACACACTAAACAACAATAATAATAATAACAACATGGAATCTCCAAGTTTTCAAAGACATGATATGAGTTCACCTGAAAACAGTGCCTTCAATGGACAAATGAGGAGGGTGTGCAGCACTGGAGATCTGCAGAAGTGTCAAAGGGAAGGATCATTGTTGGAGGAACCGAATTTCAAAGTAGGGCGTTATAGTGCTGAAGAAAGAAAAGAAAGAATATCAAAATATAGAGCCAAGAGAAGCCAGAGGAACTTCAACAAAACCATCAAGTATGCATGCCGAAAAACACTAGCCGACAATCGACCGCGCATACGTGGCAGATTCGCACGCAACGACGAGGAGCGCGACATTATTCCTATTCCAAATCACAACGCTCCATGTTCAGCCCGAGATGATGAAGACGAAGAAGTCGATTTCTGGATTGAAGGGTTGCAGTTGCATGAAGAGCAGGAGGATGTAACAGTCAACGCTTATGGACCTAATCAGTTTCAGTACTTTCGTTTCTAA 1044 0.4176 MSSGLYSFETTFQAHSSSDMVTADGGDLAFLTDPFPFFENSTTNNDIGQHCSSNQSMFDEALSSSSVDPFSSCFFSFSPPSIHLENLSLQTNNKNNRVDPNLESDFASFSSGFDVTQVVKSEECQIAVEFDYGYNNHNHQHFFPHSYSGAENVAKYMQRSFSSNSFHGKPGNFLFQNNHSDTLNNNNNNNNMESPSFQRHDMSSPENSAFNGQMRRVCSTGDLQKCQREGSLLEEPNFKVGRYSAEERKERISKYRAKRSQRNFNKTIKYACRKTLADNRPRIRGRFARNDEERDIIPIPNHNAPCSARDDEDEEVDFWIEGLQLHEEQEDVTVNAYGPNQFQYFRF* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3074 347 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 24 344 IPR045281 GO:0009909
Amo05g3074 347 ProSiteProfiles CCT domain profile. 248 290 IPR010402 GO:0005515
Amo05g3074 347 PANTHER CCT MOTIF FAMILY PROTEIN 24 344 - -
Amo05g3074 347 Pfam CCT motif 248 290 IPR010402 GO:0005515
Amo05g3074 347 MobiDBLite consensus disorder prediction 187 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3074 Amo-Chr5 91039950 91041945 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3074 244 292 C2C2-CO-like Transcription Factor Family AT5G57660 53.061 1.23e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo05g3074 CCT 9.2e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3074 - - adu:107479916 666.381