Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3067 CGGCGCTCACAATGCCTCCGTTGCCATTGGCACTCCCGCCATCGCTGCTCTCATCATAAACTCCTAACCTTCTTCTCAGTACTCCCATCATCGCTGCTCCCACCAGAGCCTCTTCATCGCGCCTCCAACCCTAACTCCAAAGCCTCTTCATCGCGCCTCCAATCCTATTCTATTACCATTTTGGCATGTATCAAGTTGATGTGTGTGGGGGGTCGAAAGGCTGTTGTTATCCATGTTCCCTTTAGATTAAGGAAAGGTTTCCGAAAGATTCATGTTAGACTTGTTAGAGAGCTTGAGAAGAAGTTCAGTGGCAAGTGCATGGTGTGGATTGACGTGCTTATTGAATTGCTAATGGATGATAAAGCTAGCATTATTGATGATGCATTATCATTTCTTACTTTGTTACTTGGATTCTCACAAGGACTAAAAGAAATAAGGAATAGTAGAGAGTTGGTGCCACTTCTCATTGATCTTCTAAGATTTGGATCAGTAAAAGGGAAGGAAAATTCTATAACACTTATTCTAGGATTTTGCAAGGAAGAAACCGAGGTAGTTGCGCGACGGTTTGCTGGCGAATCCAAGGAGCGTGCCATTGCTTCAAAGTTTGGCTGCTCATGGTTCATTAAGAGCTAG 633 0.4408 RRSQCLRCHWHSRHRCSHHKLLTFFSVLPSSLLPPEPLHRASNPNSKASSSRLQSYSITILACIKLMCVGGRKAVVIHVPFRLRKGFRKIHVRLVRELEKKFSGKCMVWIDVLIELLMDDKASIIDDALSFLTLLLGFSQGLKEIRNSRELVPLLIDLLRFGSVKGKENSITLILGFCKEETEVVARRFAGESKERAIASKFGCSWFIKS* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3067 210 Pfam Ribosomal protein S7e 57 110 IPR000554 GO:0003735|GO:0005840|GO:0006412
Amo05g3067 210 PANTHER U BOX DOMAIN-CONTAINING 110 185 - -
Amo05g3067 210 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 1 110 185 - -
Amo05g3067 210 SUPERFAMILY ARM repeat 110 183 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3067 Amo-Chr5 90524215 90526136 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3067 57 110 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 61.111 6.02e-17 73.9