Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3060 CTTAGAGAAGGTCATAGTGGCAAACTTGTGGTGGATTGCACTGGCGAAGGAGTACTGTTTATTGAAGCTGATGCAGATGTAACACGTCTCAAATGCGGTGGTTTCATCTTTGCTATACGTGTTAACCACACACTGTGTGATGGATGTGGAATTGGTCAATTCATAAAGGGCATAGCAGAAATAGCCCAAGGTGCATCAAACCCTTCAATTATCCCAGCGTGGTGTAGGGAGCTTCTTTGTGCCAGAGACCCACCAAGAGTCACATTCATCCACCATAAATACAAACAACTATCACTTGATGACAACAAAACTGTCTCCTTAAAACTCTCCCAAGCTTCCTTCTTCTTTCGCCCCCGAGAGATTGATGCATTGCGCTGCCTCCTCCCTCGTCACCTTGCTCAATCTTCCACCACCTTCGATATCCTCACGGCATGCGTGTGGCGTTGTCATACAGCTGCACTGCAATGGCAAAACCCTAACCAAGAGGTTCTTTTGATGTGCGTAGTCAATGCACGTTTCAAACCTTGCAGGTTTAGTCCTCCACTGCCTGAAGGGTTTTATGGCAATGCTTTTGTGCTTCCTACGGCAGTTTCCACTGTGGAGAAGCTATGCGGACAACCCTTGAGCTATGCGTTGGAGTTGGTGAAGAAAACAAAGAAAGAAGCAAGTGAGGAGTATGTGCACTCTACTGCTGATCTAATGGCCACTAAGGGAAAACCTGCATTTTCTTTATCGGAAGGGTCTTTTATGGTGTCAGATATGACAAAATGTGGATTCAGAGATGTGGATTATGGGTGGGGTAAGCCTTTGTATTCTGGATTAGACAAGGCTGGAATGGATGATGTTCCTGGTTTGAGCTACTTTATTCCATATACTAATTCTAAAGGCGAGTATGGTAGAGTGGTTTTAATGTGTCTGGCCGAAGAAGCCATGAAAAGGTTTGAGAAAGAGCTTCATGTGGAATACTTCAGATCAAGGATGAAATATCATCTGTATTGGATGCTTGATATCTGA 1014 0.4448 LREGHSGKLVVDCTGEGVLFIEADADVTRLKCGGFIFAIRVNHTLCDGCGIGQFIKGIAEIAQGASNPSIIPAWCRELLCARDPPRVTFIHHKYKQLSLDDNKTVSLKLSQASFFFRPREIDALRCLLPRHLAQSSTTFDILTACVWRCHTAALQWQNPNQEVLLMCVVNARFKPCRFSPPLPEGFYGNAFVLPTAVSTVEKLCGQPLSYALELVKKTKKEASEEYVHSTADLMATKGKPAFSLSEGSFMVSDMTKCGFRDVDYGWGKPLYSGLDKAGMDDVPGLSYFIPYTNSKGEYGRVVLMCLAEEAMKRFEKELHVEYFRSRMKYHLYWMLDI* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3060 337 Gene3D - 25 93 IPR023213 -
Amo05g3060 337 Pfam Transferase family 26 317 - -
Amo05g3060 337 Gene3D - 94 318 IPR023213 -
Amo05g3060 337 PANTHER ALCOHOL ACYLTRANSFERASE 4 28 - -
Amo05g3060 337 PANTHER ALCOHOL ACYLTRANSFERASE 27 324 - -
Amo05g3060 337 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 28 - -
Amo05g3060 337 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 27 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3060 Amo-Chr5 89799472 89800818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3060 1 318 Monolignol Biosynthesis Gene Families AT5G48930 25.068 1.00e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3060 K19861 K13610 gmx:100795237 431.795