Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3059 ATGAAAAACATGAGCTGCATTATTCCAATAACCTATCTTCTCTTTATTACACTCTTCTCAGCAAATGCTCAATTTGTTAAGAAGACTTACCTAGTTCAAATGGATAAGGCAGCAATGCCAAAAGCCTTCTCCAATCACCTTGATTGGTACTCATCAACAGTGAAATCAGCACTTCTCACCACTTCTCTGGAATCTTCTGATATGAAAAATGAGGAAGAGAGAATAATCTACAGTTACCAAAATGCTTTTCATGGAGTTGCAGCAAAGCTGAGCAAGGAAGAAGCTGAGAGGCTAGAGGATCAAGAAGGTGTTGTGGCCATTTTCCCTGAAAGAAAGTACCAACTACACACCACAAGAAGCCCTGAGTTCCTTGGTCTTGAACCATTATCAAAGGGAACTGATAGTATCTTTTCAGAAAATCTTGATAATGATGTTATAGTTGGAGTGCTAGACACTGGAATTTGGCCAGAAACAATTGGAAAGATCAATGAGTCAAGAGAGCACAAATCACCAAGGGATCAAGATGGCCATGGAACTCACACTGCAGCAACTGTTGCAGGCTCTGTAGTCCATGGTGCTAACCTTCTAGGCTATGCTTACGGCACTGCAAGAGGAATGGCACCAGGAGCAAGAATTGCAGCTTACAAAGTTTGCTGGATTGGAGGGTGCTTCAGCTCAGATATTCTCTCTGCCATTGATAAAGCTGTATCTGATGGAGTGCATGTCTTGTCCATTTCATTAGGTGGAGGAGTCTCATCTTATTCCCATGATAGTATTTCAACTGCTGCATTCGGAGCAATGGAGCGCGGTGTGTTCATTTCGTGTTCTGCCGGAAATGCTGGTCCTAGCCCTGCAAGTCTTGCCAATGTTGGTGCTTCACTCTATAAAGGGCCAAACACAGTATCAACTGAAAAACAATACCCTTTGGTTTACTTGGGTGGTAACTCATCAGGTACTCTTAATCCAAAAGCAATGTGCTTGGAAGGGACTTTGGATCCTCAAGTGGTTAAAGGGAAGATAGTGATTTGTGAGAGAGGGATTAGTCCAAGAGTGCAAAAGGGTCATGTGGTGAAAAATGCAGGTGGGGTTGGAATGATTCTCACCAACACTGAAACAAACGGAGAAGAGCTTGTTGCAGATTGCCACCTCCTTCCAGCAGTTGCAATAGGAGAGAAAGATGGTAAAGATCTCAAAAACTATGTCTTAACAAACAAAAATGCCACTGCAACTCTTTCATTTCTTGGAACAAGGTTAGGAATTAGGCCTTCACCTGTGGTAGCAGCATTTTCATCAAGAGGGCCTAATTTCCTCTCACTTGAAGTTCTGAAGCCAGATTTGGTTGCTCCTGGTGTGAACATTCTTGCTGCTTGGAGTGAAGATGTTGGTCCATCAGGGTTGGCAATAGATCAAAGGAGGGTGAAGTTCAGCATAGTTTCTGGAACCTCAATGTCATGCCCTCATGTGAGTGGTGTAGCTGCATTGATTAAGGCTAAGCATCCTCAATGGAGTCCAGCAGCTATAAAATCTGCACTGATGACAACAGCTTATGTTGTTGACAACACCATGAAGCCTCTGAAAGATGCATCAAATGCTGAAAAGCCTTCAAATCCTTATGATCATGGTGCCGGTCACATTAACCCCACAAAAGCACTAGACCCAGGTTTAGTCTATGATATCAAGCCACAAGATTACTTTGATTTTCTGTGCACACAGAATCTAACTCCAAACCAGTTAGGTGTCTTTGGCAAATATGCAAACAGGTCATGTGCACATTCTCTGGCTAGCCCTGGTGATTTGAACTACCCTGCAATTTCAGTGGTGTTTGCTGAGAATAAATCTATTTCAGTTATGACAGTTCATAGAACTGTGACCAATGTCGGACCTGATGTTTCCACATACCATGTTTTGGTCTCAGTGTTTAAAGGTGCTTCTGTGAAAGTTGAGCCAGAAACCTTGAATTTCACAAGGAAGTATCAGAAGCTGTCATATAAAGTTACCTTCACAACAAAAGCAAGGCAAACACAACCTGAATTTGGAGACCTTGTTTGGAAGGATGGTGTTCAGAGTGTTAGAAGCCCAATTGTGATAACTTGGTTGACACCAATAGTATGA 2112 0.4247 MKNMSCIIPITYLLFITLFSANAQFVKKTYLVQMDKAAMPKAFSNHLDWYSSTVKSALLTTSLESSDMKNEEERIIYSYQNAFHGVAAKLSKEEAERLEDQEGVVAIFPERKYQLHTTRSPEFLGLEPLSKGTDSIFSENLDNDVIVGVLDTGIWPETIGKINESREHKSPRDQDGHGTHTAATVAGSVVHGANLLGYAYGTARGMAPGARIAAYKVCWIGGCFSSDILSAIDKAVSDGVHVLSISLGGGVSSYSHDSISTAAFGAMERGVFISCSAGNAGPSPASLANVGASLYKGPNTVSTEKQYPLVYLGGNSSGTLNPKAMCLEGTLDPQVVKGKIVICERGISPRVQKGHVVKNAGGVGMILTNTETNGEELVADCHLLPAVAIGEKDGKDLKNYVLTNKNATATLSFLGTRLGIRPSPVVAAFSSRGPNFLSLEVLKPDLVAPGVNILAAWSEDVGPSGLAIDQRRVKFSIVSGTSMSCPHVSGVAALIKAKHPQWSPAAIKSALMTTAYVVDNTMKPLKDASNAEKPSNPYDHGAGHINPTKALDPGLVYDIKPQDYFDFLCTQNLTPNQLGVFGKYANRSCAHSLASPGDLNYPAISVVFAENKSISVMTVHRTVTNVGPDVSTYHVLVSVFKGASVKVEPETLNFTRKYQKLSYKVTFTTKARQTQPEFGDLVWKDGVQSVRSPIVITWLTPIV* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3059 703 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 158 IPR045051 -
Amo05g3059 703 Pfam Subtilase family 143 523 IPR000209 GO:0006508|GO:0008236
Amo05g3059 703 ProSitePatterns Serine proteases, subtilase family, serine active site. 480 490 IPR023828 -
Amo05g3059 703 Gene3D Peptidase S8/S53 domain 164 564 IPR036852 GO:0004252|GO:0006508
Amo05g3059 703 ProSiteProfiles Serine proteases, subtilase domain profile. 123 551 - -
Amo05g3059 703 PANTHER XYLEM SERINE PROTEINASE 1 19 158 - -
Amo05g3059 703 PANTHER XYLEM SERINE PROTEINASE 1 163 290 - -
Amo05g3059 703 CDD PA_subtilisin_like 290 411 - -
Amo05g3059 703 CDD Peptidases_S8_3 113 516 IPR034197 -
Amo05g3059 703 Gene3D - 568 699 - -
Amo05g3059 703 Pfam Peptidase inhibitor I9 29 116 IPR010259 -
Amo05g3059 703 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 163 290 IPR045051 -
Amo05g3059 703 PANTHER XYLEM SERINE PROTEINASE 1 290 696 - -
Amo05g3059 703 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 290 696 IPR045051 -
Amo05g3059 703 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 116 IPR037045 -
Amo05g3059 703 Pfam PA domain 306 397 IPR003137 -
Amo05g3059 703 Gene3D - 296 419 - -
Amo05g3059 703 SUPERFAMILY Subtilisin-like 115 555 IPR036852 GO:0004252|GO:0006508
Amo05g3059 703 Pfam Fibronectin type-III domain 598 696 IPR041469 -
Amo05g3059 703 PRINTS Subtilisin serine protease family (S8) signature 479 495 IPR015500 -
Amo05g3059 703 PRINTS Subtilisin serine protease family (S8) signature 173 186 IPR015500 -
Amo05g3059 703 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3059 Amo-Chr5 89795634 89798164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3059 13 702 Subtilisin-like Serine Gene Family AT5G51750 60.286 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3059 - - gmx:100794709 1031.55