Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3053 ATGCCACGTGGACAGTGGGAAAGAAGGCTCCAAACAGATATCAACATGGCAAAGAAAGCACTCACTCATGCACTCTCACCACAAAACAATAATAATAATAATAATAATAATAATAATATTGAATCCTTATCTTGTTCTTCTTCTTCCAATTCCAATTCTAATTCTTGTTCATCCAATAATAATAATAAAGCAACACAATCTTTAAGCTATGCTTCAAATGCTGATAACATAGCTCGGTTGCTCAAAGGGTGGATGAAGAAGAATAATAATAATGACACTGCTTCTAGCAAGGAGGGCATTTTAGGAACAAAAGTTTTTGGTAATGAGGAGTGTTTGGAGTCTTCAAATAATACTACTTCATCATTAGAGTTTTCTCATTCAATTTATTCCCAACAAGAAGAGAGCAAGACTGAAGAAATTGGTCAAGTTTTGATGCCTTTCCATTTGCTTGAGAAGTGGCTTCTAGATGAGACTAATATTGAGAAATTTATTTAA 495 0.3354 MPRGQWERRLQTDINMAKKALTHALSPQNNNNNNNNNNNIESLSCSSSSNSNSNSCSSNNNNKATQSLSYASNADNIARLLKGWMKKNNNNDTASSKEGILGTKVFGNEECLESSNNTTSSLEFSHSIYSQQEESKTEEIGQVLMPFHLLEKWLLDETNIEKFI* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3053 164 MobiDBLite consensus disorder prediction 25 60 - -
Amo05g3053 164 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 96 - -
Amo05g3053 164 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3053 Amo-Chr5 89732226 89733257 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3053 3 159 MYB Transcription Factor Family AT3G28910 35.329 1.47e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3053 K09422 K23865 gmx:778080 107.457