Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3043 ATGGACTTGGGAGTAGTTGATGGCAGAGGCAAGAGTGGGAATTCTTCCACAGATCTTGAGGAGCAGAAGGAATTAGTTGCGGTGCACGTTGACTCTGACGCCAAGGTTTCGGGATCTATGAACGATGAGAAGCGCAGTTCTGGATTTCCGGGAGCTTATGGATTGTGTACATGGTACTGTGCACGTTTTCTGATTAAACTCATTGCATTGATATTTCTAAAGCATGAGAGATTCCTGTTGCAACTCTCAAACTGTCGATCCCCGAGCCAGCGCCGTCGCAATGGAGCAGACATCCGTAGTGTGATTTCCTCTGTGCAGAGGGTTGCCATGGTGATTTCTCCATCTGGTATAAACCTGGCAGTTGGCTCAAAACTCTCTCCTGGTTTTCCAGAGGCTCTTACACTTGCCAACTGGATCTGCTGCAGTTATAGGCAAGTCTGCATCTGT 447 0.481 MDLGVVDGRGKSGNSSTDLEEQKELVAVHVDSDAKVSGSMNDEKRSSGFPGAYGLCTWYCARFLIKLIALIFLKHERFLLQLSNCRSPSQRRRNGADIRSVISSVQRVAMVISPSGINLAVGSKLSPGFPEALTLANWICCSYRQVCIC 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3043 149 MobiDBLite consensus disorder prediction 1 20 - -
Amo05g3043 149 PANTHER ARID DNA-BINDING DOMAIN, ZINC FINGER, CCHC-TYPE, MEKHLA-RELATED 82 143 - -
Amo05g3043 149 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 82 143 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3043 Amo-Chr5 89539090 89539922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3043 98 143 Homeobox Transcription Factor Family AT5G60690 76.087 8.56e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3043 K09338 - ahf:112742636 139.813