Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3028 ATGATTAAGGCTGTTTGTTATAATTGGTCAGATGAGAAGTGTGTAACAGTGCTGAACAACTGTTATAAAGCACTTGAAGAGAATGGGAAAGTGATTATCTTTGAGATGATCATGCCTGAAGAACCTGATTCAAGCAATTCCTCTAAGCTTGTCTCTATTGTTAACAATTCAATGTTCCTTCATGTTGGAGGCAAGGAGAGAATAGAGAAAGAATTTGGGAAGCTAAGCAAAGACTGTTTCTGTTTCGGTTTGCTTTACTACAAAGCAACTTTTACTTTTACCAAAAAGGCAATCACTACAACATTTTTGAGCTATTGCAACATGTGCGATAAATAA 336 0.3571 MIKAVCYNWSDEKCVTVLNNCYKALEENGKVIIFEMIMPEEPDSSNSSKLVSIVNNSMFLHVGGKERIEKEFGKLSKDCFCFGLLYYKATFTFTKKAITTTFLSYCNMCDK* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3028 111 Pfam O-methyltransferase domain 2 77 IPR001077 GO:0008171
Amo05g3028 111 PANTHER O-METHYLTRANSFERASE 1 79 IPR016461 GO:0008168
Amo05g3028 111 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 78 IPR029063 -
Amo05g3028 111 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 102 IPR016461 GO:0008168
Amo05g3028 111 Gene3D Vaccinia Virus protein VP39 2 78 IPR029063 -
Amo05g3028 111 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3028 Amo-Chr5 88753199 88754199 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3028 2 77 Monolignol Biosynthesis Gene Families AT5G54160 55.844 1.53e-21 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3028 - - adu:110281779 170.629