Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2956 ATGTACTTTAGGTTGGTGCAAGAGACATTTTCTTTCCAGGAGGAGGTTGCTGCAACCATGCCTGTTTGTCTCGATCGCAGGGAGTGCTTAGGTTCATCTAAGAAAATGGATCAAACAGCTTCCTTTTCTGGATATTTAAGCAACAAGCAAAAATTTAACCCAGGTATATTCTTCACTAGTCACAATTTTTATTCTTTCTCCTCATCAACGCAAATATTTTTTAATTTTATGGATCTTAACAAGTGTTGCATTTTTCAGTTCTACAACTGGAATATAATCAAGGTTAGATACTGTGATGGTTCATTGTTTACTGGTGACATCGAAGCAGTGGATCCTAAAACCAATTTGCACTACAGAGGAGGAAGAAATTTCGTTGCTATCTTTGAAGACTTGCTGGCAAAAGGAATGAGAAATGCTCAAAATGCTATTCTTTCAGGATGTTCAGCAGGAGGATTGACAGCAATACTACAATGCGATCGCTTTAGATCTCTAATTCTAGCAGGAGCCAAAGCCAAATGCATTTCAGATGCTTGTTATTTCATCAATGTAAAGGATGTCTCTGGAGCACAACACATTCAAGAGTTCTACAGTCAAGTTGTTGTAACACATGTATGTTTCTCAAATATCTATAGTCAACTTGTTACCTGA 648 0.3735 MYFRLVQETFSFQEEVAATMPVCLDRRECLGSSKKMDQTASFSGYLSNKQKFNPGIFFTSHNFYSFSSSTQIFFNFMDLNKCCIFQFYNWNIIKVRYCDGSLFTGDIEAVDPKTNLHYRGGRNFVAIFEDLLAKGMRNAQNAILSGCSAGGLTAILQCDRFRSLILAGAKAKCISDACYFINVKDVSGAQHIQEFYSQVVVTHVCFSNIYSQLVT* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2956 215 PANTHER PECTIN ACETYLESTERASE 85 208 - -
Amo05g2956 215 Pfam Pectinacetylesterase 86 208 IPR004963 GO:0016787
Amo05g2956 215 PANTHER NOTUM-RELATED 85 208 IPR004963 GO:0016787
Amo05g2956 215 PANTHER NOTUM-RELATED 22 57 IPR004963 GO:0016787
Amo05g2956 215 PANTHER PECTIN ACETYLESTERASE 22 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2956 Amo-Chr5 83981038 83981923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2956 23 209 Carbohydrate Esterase AT4G19420 46.809 5.52e-56 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2956 K19882 - gmx:100781246 215.312