Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2955 CTTTGTTGCTCGTCCCCAACTCAGACAGAGCTCATCGTCGGTGCTTGCACTCTCTCCTCTGCCGGCGCTCCCTCCGTCGTCTCCCCTAACCTGTCTCTGTTGGTGCTTGCATTCCTTGCGCTCACTACTCACGTCAATGCACGTTTTGACTGTGCCGTAGCTGCCACTAGAAGAGCACTCAACCACAACAAAGGTAGCGACTGGCCTTCTGCTTCTGGCGCTTACTGTGCCCACTATCTCCACGCCATCGCTGCCAATGTCATGGAGAGAAAGGATCACCTCGCTAAGCTTGAATCCCTTGATTACGGAAAACCACTCAATAAAGCTGCATGGGACATGTTTTACGCTGACCTTGCCGAGAAACTCGACGCTAAGCAGAAGGCACCCATTTCTCTTTCCATGGAGACTTTCAAGAGTTATGTCTTCAAAAAACCCATTGGTGTTGTTGGATTAATCACCCCATGGTATTTTCTTTTTCTTCTCTTTAAAATTTTCCTTATTAACTGTTTTATGGTTATTCATATTGGAGGTGAAACAGATCTTAGGTTTATATACTCCGCAGCTGCTTGCTTCCACAGTGGGCGTGATGATCCGATACCCAGCCCATTTAACCCGTTGACAGATGGCAGCACCCAACCCATAATTCATGTACTCACCAGGTATGATATCTTGACCCTGCTAGCTTTGGGCATTGGATATTGGTGGCGCGAAATTGTGAACAATACATTTCACAACTCTCATAATCCCCGTATGGACTATCATATATTGCTGGAAAGCCCAGATGTCTACTTTCAACCCGTTGAGACAATGCTTTACACACCAAACTTAAAATGTTTGCTCGTCCTCGAGCAAAAGAAGAAAGAGAGAGTAGAAGAAGAAGAAATGTGGGGAAAGGAATGGCTTTAA 906 0.4603 LCCSSPTQTELIVGACTLSSAGAPSVVSPNLSLLVLAFLALTTHVNARFDCAVAATRRALNHNKGSDWPSASGAYCAHYLHAIAANVMERKDHLAKLESLDYGKPLNKAAWDMFYADLAEKLDAKQKAPISLSMETFKSYVFKKPIGVVGLITPWYFLFLLFKIFLINCFMVIHIGGETDLRFIYSAAACFHSGRDDPIPSPFNPLTDGSTQPIIHVLTRYDILTLLALGIGYWWREIVNNTFHNSHNPRMDYHILLESPDVYFQPVETMLYTPNLKCLLVLEQKKKERVEEEEMWGKEWL* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2955 301 SUPERFAMILY ALDH-like 49 170 IPR016161 GO:0016491
Amo05g2955 301 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 47 161 - -
Amo05g2955 301 Pfam Aldehyde dehydrogenase family 49 161 IPR015590 GO:0016491
Amo05g2955 301 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 47 161 - -
Amo05g2955 301 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 173 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2955 Amo-Chr5 83928359 83934847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2955 50 161 Aldehyde Dehydrogenase Gene Family AT1G74920 65.000 3.13e-43 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2955 K00130 - aip:110265331 223.402