Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2952 ATGGTCGTCGTCGGCTCGTCAATGCCTCACGTCCTCGCTGCTCTGCTGAGCCGTCTCTGTTGTAATCCTCACTGCTCGCTGCAATCATGTCTCAGGCATGTTTTTGCAACATTGTCATTCATTGCTGAGATATTTATATTCCTTTATGTTGGGATGGATGCACTGGACATAGAAAATTGGGATCAGTTCAGTGCTTCTAGGACTTATCCTAGTTGGAAGAGCAGCATTTGTTTTCCCTCTCTCATTCTTATCCAATTTTCTCCAGAAATCCCCACATGTGAAAATTGA 288 0.441 MVVVGSSMPHVLAALLSRLCCNPHCSLQSCLRHVFATLSFIAEIFIFLYVGMDALDIENWDQFSASRTYPSWKSSICFPSLILIQFSPEIPTCEN* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2952 95 PANTHER SODIUM/HYDROGEN EXCHANGER 30 84 IPR018422 GO:0006812|GO:0015299|GO:0016021
Amo05g2952 95 PANTHER SODIUM/HYDROGEN EXCHANGER 30 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2952 Amo-Chr5 83636446 83637168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2952 32 61 Antiporters AT3G06370 80.000 3.17e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2952 - K14724 dcr:108226003 65.4698