Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2896 ATGGCTTCTGTGGCCCCTTCAGTTCTGAGTTGCTTAAGCATTACCAATAATCTAGTAATGATTGCTCTCGTTTTTCTAATCTTAGTTGTTCCGCTATTCTTTCTTTTGCGAAGCTCCAAAGTCGGCCGCCGCCGAGGAGGCAAAGAGCCACCGCTGGCGGCGGGAGCATGGCCCATAATAGGCCATCTCTGGCTCTTCACCCGTTCCCAGCCACCACAGATAACTCTAGGCGCCATGGCCGACAAATACGGAGCCATATTCAGGATCAAGATCGGATCACAACGTGCTGTGGTCATCAACAACTGGAAAACCGCTAAGGAATGCTTCACCACCAACGACATCGCCCTGTCATCGCGGCCAAGGGTCGTCGCCGTCGAACACCTTACCTATAACCAAGCCATAGTGTCGTTCGCCCCTTATGGCCATTATTGGCGCGAGATGCGAAGGATTGCCAACCAGGAATTGCTCTCCACTCGCCGAATCGAGTTATCACGCCACCTTCGTGTCTCCGAGTTAGAAGCCAGCATCAAAGCGCTCTACAAACTCTGGGCTGAGAAACACAACAATAACAACGACAACGACGCCTCCTCCTCGGGCTATGTTGCGGTGGAGATGAAGAAGTGGTTTGGAGAGTTGATGCTCAGTATGGTTCTTAGAGTGGTTGCGGGAAAACGATATTTTGGTGGTTCTGATGAGGAGGAAGCACAGCGGTTCTTGAAAACCATGAGAGAATTCATGCGGCAGTTGGGGTTGGTTGTGGTGGGTGACGCTGTTCCCTGGCTTCGGTGGCTGGATTTGGGTGGGCACGAGAAAGCCATGAAAGAGACCGCTAAGGAGATGGACGCCATTATGGTGGAGTGGTTAGAGGAGCATCGCCGGAAAAGAGCTAATTCTGATCAGGATGGTGGCGATCAAGACTTCATGGACGTCATGCTCTCAATTCTTGATGGTACTCAACTTGCTGGATTTGATTCCGATACTGTCATCAAAGCCACCACTTGGATTCTGATGGGAGGATCGATTGACACCACTTCAGGAACTCTTATATGGATATTATCTTGTATGTTGAACAATACAGGCACAATAGAACAAGCACAAAAGGAGTTGAACATCTATGTTGGTAAAGACAGACTTGTAAACGAAACAGACATAAGTAAGTTGGTGTACATTCAAGCCATCGTTAAAGAGACATTAAGGTTATACCCTACAGCAATTTTCTCAGGACCTCGTGAGTTTGCGGATGATTGCTATGTTAATGGCTACTACATTTCAAAAGGAACGCAACTAATCACAAATTTATGGAAGATTCACACGGATCCTAGCATTTGGTCTGACCCATTGGAATTTAAGCCAGAGAGGTTCCTTACCACTCACAAAGATGTTGATGTTAGAGGTAACCACTTTGAGTTGATCCCATTTGGAAGTGGGAGAAGAATGTGTCCCGGACTATCATTTGCCCTTCCCATGATTCATCTAACTTTGGCTACTTTCTTGCAATCCTTTGAATTTTCAAGGCCATCTGATGAACCCATTGATATGACTGAAATATTTGGCCTCACAACTATGAAAGCTACTCCCCTTGATGTTCTCATCAAGCCACGTCTTTCTTCTAGGCTCTACGGTTATCTTGATATATTTTATTTTATTCAAAAATATTATTTGTACAGAAATTAA 1674 0.4594 MASVAPSVLSCLSITNNLVMIALVFLILVVPLFFLLRSSKVGRRRGGKEPPLAAGAWPIIGHLWLFTRSQPPQITLGAMADKYGAIFRIKIGSQRAVVINNWKTAKECFTTNDIALSSRPRVVAVEHLTYNQAIVSFAPYGHYWREMRRIANQELLSTRRIELSRHLRVSELEASIKALYKLWAEKHNNNNDNDASSSGYVAVEMKKWFGELMLSMVLRVVAGKRYFGGSDEEEAQRFLKTMREFMRQLGLVVVGDAVPWLRWLDLGGHEKAMKETAKEMDAIMVEWLEEHRRKRANSDQDGGDQDFMDVMLSILDGTQLAGFDSDTVIKATTWILMGGSIDTTSGTLIWILSCMLNNTGTIEQAQKELNIYVGKDRLVNETDISKLVYIQAIVKETLRLYPTAIFSGPREFADDCYVNGYYISKGTQLITNLWKIHTDPSIWSDPLEFKPERFLTTHKDVDVRGNHFELIPFGSGRRMCPGLSFALPMIHLTLATFLQSFEFSRPSDEPIDMTEIFGLTTMKATPLDVLIKPRLSSRLYGYLDIFYFIQKYYLYRN* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2896 557 SUPERFAMILY Cytochrome P450 56 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2896 557 PANTHER CYTOCHROME P450 82A2 16 540 - -
Amo05g2896 557 Pfam Cytochrome P450 54 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2896 557 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2896 557 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2896 557 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2896 557 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2896 557 PRINTS E-class P450 group I signature 391 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2896 557 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2896 557 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2896 557 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2896 557 PANTHER CYTOCHROME P450 82C3-RELATED 16 540 - -
Amo05g2896 557 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
Amo05g2896 557 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2896 557 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2896 557 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2896 557 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2896 557 Gene3D Cytochrome P450 40 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2896 Amo-Chr5 80336756 80338856 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2896 51 540 Cytochrome P450 AT4G31940 47.600 6.05e-168 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2896 - - qsu:112023929 624.009