Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2895 ATGACATGGACACTTTCGTTATTACTGAATAATCGCCACGTTTTGAAGAAGGTTCAAGATGAACTAGACGAGCAAGTAGGCAAGGAGAGACTAGTGAAGGAATCAGATATTAACAAACTAAAATACCTTGAAGCTGTGGTCAAAGAATCACTGCGATTGTACCCGGCTGGGCCACTATCAGGGCTTCGTATATTCACAGAGGACTGTACCTTAGGGGGTTACCATATCAAACAAGGCACACGATTGTTCTTGAATCTTTGGAAGCTTCACAGGGATCCTCGCGTATGGTCAAACCCACTGGAATTCAAGCCGGAGAGGTTCATAAGCACGCACAGGGATGTGGATGTGAAGGGTCAGCACTTCGAGCTTCTTCCGTTTGGTGGCGGAAGAAGGTCGTGTCCTGGCATAACATTTGGGCTTCAAATGACGAAGTTGGCGTTAGCAGCATTTTTGCATGCATTTGAGATCACAACTCCCTCAGATGCTCCTGTTGATATGAGTGCTAAGTATGGACTCACAATCATCAAAACCACACCGCTTGAGGTTTTCGCCAAACCTCGTTTATCCCCTTCTGTTTTATCATTGAACACCCTTGCATGA 600 0.455 MTWTLSLLLNNRHVLKKVQDELDEQVGKERLVKESDINKLKYLEAVVKESLRLYPAGPLSGLRIFTEDCTLGGYHIKQGTRLFLNLWKLHRDPRVWSNPLEFKPERFISTHRDVDVKGQHFELLPFGGGRRSCPGITFGLQMTKLALAAFLHAFEITTPSDAPVDMSAKYGLTIIKTTPLEVFAKPRLSPSVLSLNTLA* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2895 199 SUPERFAMILY Cytochrome P450 1 187 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2895 199 PRINTS P450 superfamily signature 45 56 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2895 199 PRINTS P450 superfamily signature 124 133 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2895 199 PRINTS P450 superfamily signature 10 23 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2895 199 PANTHER CYTOCHROME P450 82C3-RELATED 1 192 - -
Amo05g2895 199 Pfam Cytochrome P450 1 170 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2895 199 Gene3D Cytochrome P450 1 186 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2895 199 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 192 - -
Amo05g2895 199 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 126 135 IPR017972 GO:0005506|GO:0016705
Amo05g2895 199 PRINTS E-class P450 group I signature 44 62 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2895 199 PRINTS E-class P450 group I signature 1 27 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2895 199 PRINTS E-class P450 group I signature 123 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2895 199 PRINTS E-class P450 group I signature 133 156 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2895 199 PRINTS E-class P450 group I signature 85 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2895 Amo-Chr5 80325895 80326494 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2895 1 188 Cytochrome P450 AT4G31950 59.259 5.29e-78 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2895 - - gmx:100810391 313.538