Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2892 ATGATCCACGCCATAGTTGTCGGCATACTAATAGTTTCTTGCTACTTGTACTTGACCAAGAGAGCAGCACCACGTGATGACTGCCGCAGGCCACCGATGGCAGATGGTGGGTGGCCGTTGATCGGTCACCTTCACCTCCTAGGTGGTTCATCAGGGAAGCCACCGTACGTGACCCTGGGAAACTTAGCAGACAAGTATGGACCAATATTCAGCATCCGAATTGGTGTTCACAATGCCGTGGTTGTGAGTTCTTGGGAGCTAGCCAGGGAGTGTTTCACGACCCTCGATGTCGTTGTCTCTTCTCGTCCCAAGTTCACTGCCGCAAAGATTCTGGCACACGACTATGTCAACTTTGGGTTCGCTCCTTACGGTGATTTATGGCGCGAGATGCGTAAGATAACCACTTCAGAGTTACTCTCCACTCGTCGGTTCGAGATGCTTCGAGGTGTTAGAGATTCAGAGGTGGAGGCATCAATGAAAGAGGTGTACAGAAAATGTGCAGAGAAAAGAGATGGTGATTTGATGGTGGAGATGAAGAAGTGGCTGGGGGATTTGAACCTCAACGTTGTTCTGAAAATGGTTGCCGGGAAGAGATATAGAGCAAGAAGAAGCAAAGATGAGGAACGAGAAGTCCGGAGGATCAGGAGGGCGTTCAGGGAGTTCTTTCGCCTGATGGGGGTGGTTGTGATTGGGGACGCCATTCCCTGTCTTGGGTGGGTTGATCTTGGTGGCCAAGTGAAAGAGATGAAGAAGACCGCTAAAGAGATGGACGAGATCGTGTCCGAATGGTTGGAAGAGCATCGGAGAAGAAGAAGAGACTCTGATGATCATGAGAGTGAGAACTCAATAGAGCAAGACTTCATTGACGTCCTGCTTTCTGTTCTTGATAGTGCTCATCTTAACGGTTATCATCTTGACACTGTCATCAAAGCCACTTGTTTGATGATAATTTCAGCGGCAACTGATACAACAACAGTTACCATGACATGGACACTTTCGTTACTGCTAAATCATCGCCACATTCTAAAGAAAGTTCAAGACGAGCTAGACGATAAGGTAGGAAAAGAAAGAGTGGTGAAGGAATCAGATGTTAACAAACTAACATACCTTGAAGCTGTGGTCAAAGAATCGATGCGATTGTACCCCGCTGGACCACTATCAGGACCTCGTGAATTCACAGAGGATTGTAGCTTAGGGGGTTATCATATCAAAGCAGGTACTCGAATGCTCTTGAACCTTTGGAAGCTTCACAGAGACCCTCGCGTATGGTCAGATCCAATGGAATTTAAACCAGAGAGGTTTCTAAGCGCACACAAAGATGTGGATGTGAAGGGTCAGCATTTCGAGCTTCTTCCGTTTGGCGGCGGAAGAAGGGTTTGCCCCGGTGCGTCATTTGGGCTTCAAATGACGAAATTGGCATTAGCTGCATTCTTGCATGCGTTTGAGGTCACAACTCCCTCAGATGCTCCTGTTGATATGAGTGCGACGTTTGGCCTCACAATCATCAAAACCACACCGCTTGAGGTTTTAGTCAAACGTCGCCTATCACCTTCTCTGATCTTCATATGA 1569 0.4761 MIHAIVVGILIVSCYLYLTKRAAPRDDCRRPPMADGGWPLIGHLHLLGGSSGKPPYVTLGNLADKYGPIFSIRIGVHNAVVVSSWELARECFTTLDVVVSSRPKFTAAKILAHDYVNFGFAPYGDLWREMRKITTSELLSTRRFEMLRGVRDSEVEASMKEVYRKCAEKRDGDLMVEMKKWLGDLNLNVVLKMVAGKRYRARRSKDEEREVRRIRRAFREFFRLMGVVVIGDAIPCLGWVDLGGQVKEMKKTAKEMDEIVSEWLEEHRRRRRDSDDHESENSIEQDFIDVLLSVLDSAHLNGYHLDTVIKATCLMIISAATDTTTVTMTWTLSLLLNHRHILKKVQDELDDKVGKERVVKESDVNKLTYLEAVVKESMRLYPAGPLSGPREFTEDCSLGGYHIKAGTRMLLNLWKLHRDPRVWSDPMEFKPERFLSAHKDVDVKGQHFELLPFGGGRRVCPGASFGLQMTKLALAAFLHAFEVTTPSDAPVDMSATFGLTIIKTTPLEVLVKRRLSPSLIFI* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2892 522 Coils Coil 246 266 - -
Amo05g2892 522 Pfam Cytochrome P450 33 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2892 522 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 519 - -
Amo05g2892 522 SUPERFAMILY Cytochrome P450 37 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2892 522 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2892 522 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2892 522 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2892 522 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2892 522 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2892 522 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2892 522 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2892 522 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2892 522 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2892 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Amo05g2892 522 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2892 522 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2892 522 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2892 522 PANTHER CYTOCHROME P450 82C3-RELATED 7 519 - -
Amo05g2892 522 Gene3D Cytochrome P450 22 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2892 Amo-Chr5 80301537 80303822 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2892 32 520 Cytochrome P450 AT4G31940 48.290 1.66e-173 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2892 - - gmx:100810391 705.671