Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2869 TATTCAATTTCTTTTAACACAACTACCACCACGAGCAAAGAGAGGTTTGGGTTCAAGAGAAAAACAGGGACAAGTCTTGTGTATTTGATCAACAAAGAGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGATGGGGCTGGTGATGATTTGTTTAAAGAGCTATGGAGGCTGTGCAGGGCCATTAATGGATGCCCCTCGTGTTCAAGACAGAGTTCTCTATTTCCCTCAGGGTCACATTGAATTGTTGACAAAACCTACAGAATAA 324 0.4012 YSISFNTTTTTSKERFGFKRKTGTSLVYLINKEIDEELLQEVVNMGFDRNQLVESLCNRIQNEMGLVMICLKSYGGCAGPLMDAPRVQDRVLYFPQGHIELLTKPTE* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2869 107 CDD UBA_SnRK1_plant 34 63 - -
Amo05g2869 107 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 33 56 IPR015940 -
Amo05g2869 107 Pfam UBA/TS-N domain 34 63 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2869 Amo-Chr5 78402206 78403912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2869 77 107 B3 DNA Binding Superfamily AT4G23980 61.290 9.41e-09 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2869 K07198 - ahf:114925841 141.739