Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2826 ATGGTTATGGGACTAAGTAGTCACTTTATAAACTCACAAGTTTTGCTAACACTTTGCTTTAGTTTCTTCCTACATGATGCTGGAAGTTCCTTAGACACCATCACTTCCTCTTACATCCTTAAAGCCCCCGAAACTTTAAGCTCTAATGATGGTATGTTCCATCTAGGATTCTTCACCCCTACCAACTCCACCTTTTCCTACCTCGGAATCTGGTACATAACCAAACCTCCTTTGGTGTGGGTTGCCAACAGAGACCAACCAATAAAAGATTCTTCTTCTTCTTCCTCTGGTGTGCTCAAGATATCTAAAGACGGAAACCTTGTTCTGCTGAATTCACAAGATGACATCCTTTGGTCTACAAATGCGTCCAATATTTCATCTAATACAACCGCTAAGCTTCTGAACACCGGAAACCTTGTGCTGCAAGAAAACGCGACAGGAAGGATCCTATGGCAGAGTTTCCAACACCCCACAAACGCTTTCTTGGAGGGAATGGAACTCAGCACCGGTAACATCAGCGGCGTCCAGAGAACAAAACTCACCTCGTGGAAAAGTCATGAGGATGCATCCATTGGAGAATTCTCAATGAGTCTTGAACGCCTGAATATCCCGGAAGTGTTGGTGTGGAGAGGGAGCCAACCTCACTGGCGTAGTGGTCCATGGAATGGTCAAATATTTCTGGGGATACCTGACATGGCAACCAACTATCTTTTCGGGTTTTACTTAAGTCAAGATAACGGCAATACTAATTACTATCTTGCTTACAACTACGGGAATCAAACTTTTCCTGTATACTACTTATTAAGTGTTGATGGAAATGTATACCAAGTATCTTGGGATCCTGAAAAGAGAGATTGGTATATCTCCTGGTTAGCTATAAGTTCAGAGTGTGATGTGTATGGCAAGTGTGGAGAGTTTGGAATTTGTGATCACAGGAGCACTCCGATTTGCAGGTGTTTGAGAGGGTATAAGCCAAGGAATGATGAGGAATGGAGCAAACAGAACTGGAGCAGCGGTTGTGTTAGGAAGGAACCTTTTCAGTGTGAGAGTGAGAGTGTCAAAAATAATAAAGAAGATGGATTTGTGAAGATGCAGAATGCTAAGGTTCCAGCCTCTATCTTGTCCTATGCGGCCGAGGATGATTGCAAAGCTGAGTGCTTAGGCAACTGCTCCTGCACAGCATATGCATATGATGCTGGCACTGGCTGCATGTCATGGATTGGAAGCTTAATTGATCTTCAGATATTCTCAACTGGAGGAACTGATCTTTACATTCGAGTTCCCTATGCAGAGCTAGGTGAAGACAAGAAAAATGTCACAGTGGTCATTGCAGTGTCAGTGATAGTAGGAACCACTATCATTCTCACCTGTGCTTATATCTTCTGGAAAAGGATTCAAATCAGAGATCAATCAAACCAGATATTGAATTGGGAAAAACGTTTTAGTATAATCGATGGAATAGCTCGGGGTTTACTTTATCTTCACAGAGATTCTAGACTGAGAATTATACATAGAGATTTGAAGTTGAGTAACATACTGCTTGATGAAGAGTTAAATCCAAAAATTGCGGATTTTGGCCTGGCAAAAATTTTTAGTCGAACCGAAGATGCAGTCAATACTAGAAGAGTTAGTTTATACAGCGGCTATATGTCACCAGAATATGCTATGGAAGGACTATTTTCAGAGAAATCTGATGTATTTAGCTTTGGTGTTTTGCTGTTGGAGATTGTGAGTAGAAGAAAAAATACCAGCTTTTGTGAAGATTCTAAATCTTTGAGCCTCTTGGGATTTGCATGGAATTTATGGAATGCTGATAACACTGCATCTCTAATAGATCCAGAAATATCAAGTTCATGCAACAAAGAAGATATAATGAGGTGCATACATATTGGTCTTCTATGTGTACAAGAACTTGCAAGAGATAGGCCTACAATGACTGCAGTGGTTTCAATGCTTAATAGTGAGACTGTTAATCTTCCTTCTCCCAAGCAGCCAGCATTCGTTCAGAGGCAGACTCTGCTGGATATAGAGTCTTCTATGACAAATGATGGATTTTGCTCGATTAATAATCTTTGGCGTCTTACTGTTGGAGATTGTGAGTATGAGGGAAAAATACAGACTTTAAAGCTTAACAGCAAAATTTATGGAATGCTGATAAGATCCAGAAATATCAAGTTCATGCAACAAAGAAGATATAATGAGGTGCTACATATTGGTCTTCTATATGTACAAGAGCTTGCAAGAGATAGACCTACAATGACTTCAGTAATTTCAATGCTTAATAGTGAGACAATCAATCTTCCTCCTCCAAAACAGCCAGCATTCATTCTGAGGCAGACTATGCTTGATATAGAGTCTTCTCTTACAAATGATGGAAAAGGTTCTATCAATAATGTGACCATAACAAATATTCAAGGAAGATAA 2424 0.4014 MVMGLSSHFINSQVLLTLCFSFFLHDAGSSLDTITSSYILKAPETLSSNDGMFHLGFFTPTNSTFSYLGIWYITKPPLVWVANRDQPIKDSSSSSSGVLKISKDGNLVLLNSQDDILWSTNASNISSNTTAKLLNTGNLVLQENATGRILWQSFQHPTNAFLEGMELSTGNISGVQRTKLTSWKSHEDASIGEFSMSLERLNIPEVLVWRGSQPHWRSGPWNGQIFLGIPDMATNYLFGFYLSQDNGNTNYYLAYNYGNQTFPVYYLLSVDGNVYQVSWDPEKRDWYISWLAISSECDVYGKCGEFGICDHRSTPICRCLRGYKPRNDEEWSKQNWSSGCVRKEPFQCESESVKNNKEDGFVKMQNAKVPASILSYAAEDDCKAECLGNCSCTAYAYDAGTGCMSWIGSLIDLQIFSTGGTDLYIRVPYAELGEDKKNVTVVIAVSVIVGTTIILTCAYIFWKRIQIRDQSNQILNWEKRFSIIDGIARGLLYLHRDSRLRIIHRDLKLSNILLDEELNPKIADFGLAKIFSRTEDAVNTRRVSLYSGYMSPEYAMEGLFSEKSDVFSFGVLLLEIVSRRKNTSFCEDSKSLSLLGFAWNLWNADNTASLIDPEISSSCNKEDIMRCIHIGLLCVQELARDRPTMTAVVSMLNSETVNLPSPKQPAFVQRQTLLDIESSMTNDGFCSINNLWRLTVGDCEYEGKIQTLKLNSKIYGMLIRSRNIKFMQQRRYNEVLHIGLLYVQELARDRPTMTSVISMLNSETINLPPPKQPAFILRQTMLDIESSLTNDGKGSINNVTITNIQGR* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2826 807 Gene3D Transferase(Phosphotransferase) domain 1 464 664 - -
Amo05g2826 807 SMART ntp_6 356 427 IPR003609 -
Amo05g2826 807 PANTHER - 733 787 - -
Amo05g2826 807 SUPERFAMILY Protein kinase-like (PK-like) 470 676 IPR011009 -
Amo05g2826 807 ProSiteProfiles Protein kinase domain profile. 251 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g2826 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 223 IPR036426 -
Amo05g2826 807 Pfam S-locus glycoprotein domain 216 326 IPR000858 GO:0048544
Amo05g2826 807 Pfam Domain of unknown function (DUF3403) 762 807 IPR021820 GO:0004674
Amo05g2826 807 ProSiteProfiles PAN/Apple domain profile. 348 428 IPR003609 -
Amo05g2826 807 ProSiteProfiles Bulb-type lectin domain profile. 31 154 IPR001480 -
Amo05g2826 807 CDD B_lectin 37 157 IPR001480 -
Amo05g2826 807 CDD PAN_AP_plant 354 428 - -
Amo05g2826 807 SMART blect_4 37 157 IPR001480 -
Amo05g2826 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Amo05g2826 807 Pfam PAN-like domain 355 413 IPR003609 -
Amo05g2826 807 PANTHER - 471 690 - -
Amo05g2826 807 PANTHER - 15 468 - -
Amo05g2826 807 PIRSF SRK 466 699 IPR024171 GO:0004674
Amo05g2826 807 PIRSF SRK 709 807 IPR024171 GO:0004674
Amo05g2826 807 PIRSF SRK 4 473 IPR024171 GO:0004674
Amo05g2826 807 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 15 468 - -
Amo05g2826 807 Pfam D-mannose binding lectin 78 184 IPR001480 -
Amo05g2826 807 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 471 690 - -
Amo05g2826 807 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 733 787 - -
Amo05g2826 807 Gene3D - 27 155 IPR036426 -
Amo05g2826 807 Pfam Protein tyrosine and serine/threonine kinase 467 652 IPR001245 GO:0004672|GO:0006468
Amo05g2826 807 SMART serkin_6 410 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2826 Amo-Chr5 74291555 74295756 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2826 731 807 Receptor kinase-like Gene Family AT4G23150 38.824 2.63e-07 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo05g2826 PK_Tyr_Ser-Thr 1.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2826 - - aip:110267496 951.044