Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2822 ATGGCTTCTATTTCTTCAGTTACAGATGATGGAGGGAAAAAGAACAAGATTGTGATAGTAACAGCTATTATAGCAGGATTAATCTCTATAGGGATTTTTGTRTTTATAGTATGGAGGTGCAAGGCAAAACTCAAACTCAAAGTTTCGTCCGCTTCATGTCGCAAGAATAGTGATGTAATACCAATTTATGATGCAAGCAAGAGTAAAGAGATGTCWACAGAATTTTCAGCATCAGCTGAYCTTAGTTTGGAGGGTAATGAGCTAAGTGGACCAGAACTTCCACTTTTCAATTTTAATTGCATTTCCATAGCCACAGACAACTTTTCACAAGGAAATAAGCTTGGGGAAGGGGGTTTCGGTCCTGTTTATAAGGGAAAGCTTCCAAGTGGAGAACAAATAGCTGTCAAAAGGCTTTCAAGACATTCCTGCCAAGGTTTGGAGGAGTTCAAGAATGAAATGATGCTGATAGCCAAACTACAACACAGAAATTTGGTTAGACAAATGGGTTGCTCTATTCGCGGTGAAGAAAAATTGCTTGTATATGAGTACATGCCRAACAAAAGCTTGGATCGCTTTTTATTTGATCCGGTCAAGCAAACAWAGTTAWACTGGGCAAGACGCTATGATATMATTGAAGGCATTGCAAGAGGACTACTTTATCTACATCGAGATTCAAGACTAAGAATAATTCATCGAGATCTAAAAGCAAGCAATATTTTATTGGACGAAAACATGAACCCAAAAATCTCAGACTTCGGGCTGGCCAGGATATTTGGTGGAAACCAGAACGAAGGCAATACAACCAGAGTGGTTGAGATTGTGAGTGGTCGGAGGAACACTAGCTTTCGTCACTCRGATGACACAAGTCTCATTGGATATGCATGGCATCTTTGGAATGAAGGCAGAGCAATGGAGCTTGTAGACCCTTGCATACGTGAATCAAGTCCTAAAGACAAAGCYTTGAGGTGCATAAACATAGGAATGTTGTGTGTGCAAGATTCAGCATCTCATAGACCAAACATGTCCAATGTAGTGTTGATGCTAGAAAGTGAGACAACCACTCTTCCATTACCTTCACAACCTTTGGTCACTTCCATGAGGAGATCTGAGGACAGAGAATTTCATATGGAAGGTCTTGATGTTTCAAATGATTTAACTGTCACAATGGTGGGCAGATTGATTAAAGGTCAAGAAATTGCTGTGAAGAGGTTATCAGAAGATTCTGGACAAGGAATTGAAGAGTTTAAGAATGAAGTCAAGTTAATTGYCAAGCTCCAACACCGAAATCTTGTGCGGTTGCTTGGTTGCTGCATTGAGAAGGATGAAAAAATMTTGGTGTATGAGTATATGAAAAATAGAAGCCTTGATTCCATTTTGTTTGACAAATCAAAAAGAACCTTACTTGACTGGGARAGGCGTTACARTATTATATATGGGATRGCAAGAGGACTTCTTTATTTGCATCAAGATTCAAGATTTCGAATTATTCATAGAGATCTCAAGACAAGTAACATATTATTAGATAATGAAATGAATCCAAAGATATCAGACTTTGGAATGGCTAGAATTTTCGGCAAAGATCAAATGCAAGCAAAAACATTAAGAATTATCGTAACTGGGAAGAAGAATAGAGAGTTTTATAGTGAGAATGATGAATTGAATCTTCTGGGAAATGTATGGAAGCACTGGCATGAAGGAACTGCATTGTCACTTCTTGATCCATCTATTGACAATTTATACACAGAAGCTGAAGTTGTAAAATGCATACATATTGGTCTCTTATGCGTCCAAGAACATGCAGAAGATAGGCCAACAATGTCTTCAGTGGTCTTAATGTTGAGTAGTGAAGCTCCATCAATGCCAAATCCTAAAAATCCGGGATTTTCAACATGGAAAAAACATCTACAGATTGATTCATCGTCAAATAAACAAGATGAAACATGGAGTGTGAATCAAGTCACAATCACAATGTTAGATGCTAGGTAA 1986 0.3781 MASISSVTDDGGKKNKIVIVTAIIAGLISIGIFVFIVWRCKAKLKLKVSSASCRKNSDVIPIYDASKSKEMSTEFSASADLSLEGNELSGPELPLFNFNCISIATDNFSQGNKLGEGGFGPVYKGKLPSGEQIAVKRLSRHSCQGLEEFKNEMMLIAKLQHRNLVRQMGCSIRGEEKLLVYEYMPNKSLDRFLFDPVKQTXLXWARRYDIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEGNTTRVVEIVSGRRNTSFRHSDDTSLIGYAWHLWNEGRAMELVDPCIRESSPKDKALRCINIGMLCVQDSASHRPNMSNVVLMLESETTTLPLPSQPLVTSMRRSEDREFHMEGLDVSNDLTVTMVGRLIKGQEIAVKRLSEDSGQGIEEFKNEVKLIXKLQHRNLVRLLGCCIEKDEKILVYEYMKNRSLDSILFDKSKRTLLDWERRYXIIYGXARGLLYLHQDSRFRIIHRDLKTSNILLDNEMNPKISDFGMARIFGKDQMQAKTLRIIVTGKKNREFYSENDELNLLGNVWKHWHEGTALSLLDPSIDNLYTEAEVVKCIHIGLLCVQEHAEDRPTMSSVVLMLSSEAPSMPNPKNPGFSTWKKHLQIDSSSNKQDETWSVNQVTITMLDAR* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2822 661 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 391 538 - -
Amo05g2822 661 Gene3D Transferase(Phosphotransferase) domain 1 538 629 - -
Amo05g2822 661 ProSiteProfiles Protein kinase domain profile. 108 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g2822 661 Gene3D Transferase(Phosphotransferase) domain 1 270 356 - -
Amo05g2822 661 Gene3D Transferase(Phosphotransferase) domain 1 184 269 - -
Amo05g2822 661 Gene3D Transferase(Phosphotransferase) domain 1 450 537 - -
Amo05g2822 661 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 271 390 - -
Amo05g2822 661 Pfam Protein kinase domain 109 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g2822 661 SUPERFAMILY Protein kinase-like (PK-like) 390 639 IPR011009 -
Amo05g2822 661 SMART serkin_6 108 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g2822 661 Gene3D Phosphorylase Kinase; domain 1 84 183 - -
Amo05g2822 661 Gene3D Phosphorylase Kinase; domain 1 371 449 - -
Amo05g2822 661 ProSiteProfiles Protein kinase domain profile. 376 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g2822 661 Pfam Domain of unknown function (DUF3403) 615 661 IPR021820 GO:0004674
Amo05g2822 661 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 537 661 - -
Amo05g2822 661 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 271 390 - -
Amo05g2822 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Amo05g2822 661 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 537 661 - -
Amo05g2822 661 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 391 538 - -
Amo05g2822 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Amo05g2822 661 SUPERFAMILY Protein kinase-like (PK-like) 93 374 IPR011009 -
Amo05g2822 661 Pfam Protein tyrosine and serine/threonine kinase 396 530 IPR001245 GO:0004672|GO:0006468
Amo05g2822 661 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 9 271 - -
Amo05g2822 661 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 9 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2822 Amo-Chr5 74235344 74253611 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2822 391 628 Receptor kinase-like Gene Family AT4G23230 51.852 2.27e-86 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo05g2822 Pkinase 8.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2822 - - gmx:102660295 623.624