Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2813 ATGGTGTTTTCTGCGTCTGTTGGGTCTGTAGCATTGCCCCCTCCGAGTGTGAGAGTGAGTGCGAAGAGGTGGAGTAGTGTGGTGGTTGCTGCTGCTCATGAACCCTTCCCTTCCTTTCTTCCTAAGCTCATTGACAGAATCCATGATCCCTTCGCTCGTAGACTCGCCATGCGAATTCAGAGGCTCCCTGTTCCTGTTAGGTTCTCAGAAAATCCCATCATGAGTAGTTGTGTTAAGCCACTTATACAAAAGAAGGAAACTCCAATTGTTCTTCTACATGGCTTTGACAGCTCATGTATGGAATGGAGATATGCCTATCCACTGCTGGAAGAATCAGGTTTTGAGACTTGGGCCATCGACATTCTTGGTTGGGGTTTCTCTGATTTAGAAAAACTTCCCGCTTGTGACGTGGTATCAAAGCGTGAGCATTTCTATCAGTTTTGGAAATCCTACATCAAAAGGCCAATGATATTGGTTGGACCAAGCCTTGGATCTGCTGTCGCTGTTGACTTTACAGTGAATTATCCAGAAGCTGTGGAAAAGCTTGTTCTCATTGATGCTAGTGTATATGCAGAGGGAACAGGAAAGCTAGCAACGTTGCCAAAAGCTGTTGCTTATGCTGGGGTCGGTCGCTTGCACTGTTTGATGCCTTGGTGGGATGATGCTACGGTTGGTTTCATGACTAGTGGCGGTTACAATGTTTCTTCCTTAATAGAAAAGGTGAAACAGAAAACACTCATCATTTGGGGTGAAACGACCGCATCATCAGCAACAAGCTTGCAGTGGTTTAGTTTTTTTTATATTGCCAAACATGGAGAAACTATAGGGAGCCAATATTTCCAACTACACTGCGAACTACCTGATGCAGTGATACGCCAAATACCAAACTGCGGCCACATTCCTCATCTGGAGAAGCCAAGTTCTGTTGTCAAATTAATTGTTGAATTTGTTCAGAGAGAGGCCAAGAAATTAGACAAATGTGTTACACAAGTATGA 996 0.4428 MVFSASVGSVALPPPSVRVSAKRWSSVVVAAAHEPFPSFLPKLIDRIHDPFARRLAMRIQRLPVPVRFSENPIMSSCVKPLIQKKETPIVLLHGFDSSCMEWRYAYPLLEESGFETWAIDILGWGFSDLEKLPACDVVSKREHFYQFWKSYIKRPMILVGPSLGSAVAVDFTVNYPEAVEKLVLIDASVYAEGTGKLATLPKAVAYAGVGRLHCLMPWWDDATVGFMTSGGYNVSSLIEKVKQKTLIIWGETTASSATSLQWFSFFYIAKHGETIGSQYFQLHCELPDAVIRQIPNCGHIPHLEKPSSVVKLIVEFVQREAKKLDKCVTQV* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2813 331 PRINTS Alpha/beta hydrolase fold signature 158 171 IPR000073 -
Amo05g2813 331 PRINTS Alpha/beta hydrolase fold signature 113 128 IPR000073 -
Amo05g2813 331 PRINTS Alpha/beta hydrolase fold signature 172 185 IPR000073 -
Amo05g2813 331 Gene3D alpha/beta hydrolase 78 203 IPR029058 -
Amo05g2813 331 Pfam Alpha/beta hydrolase family 89 310 IPR000073 -
Amo05g2813 331 PANTHER HYDROLASE 280 331 - -
Amo05g2813 331 PANTHER HYDROLASE 16 209 - -
Amo05g2813 331 Gene3D alpha/beta hydrolase 204 319 IPR029058 -
Amo05g2813 331 PANTHER ALPHA/BETA FOLD HYDROLASE 280 331 - -
Amo05g2813 331 PANTHER ALPHA/BETA FOLD HYDROLASE 16 209 - -
Amo05g2813 331 PANTHER ALPHA/BETA FOLD HYDROLASE 209 252 - -
Amo05g2813 331 PANTHER HYDROLASE 209 252 - -
Amo05g2813 331 SUPERFAMILY alpha/beta-Hydrolases 86 319 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2813 Amo-Chr5 73304041 73312005 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2813 - - gmx:100800197 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g2813 05 73304041 73312005 Amo15g0262 15 9713442 9722360 hybridization
Amo05g2813 05 73304041 73312005 Amo05g1697 05 33520565 33529399 PCT
Amo05g2813 05 73304041 73312005 Amo15g0261 15 9705647 9712990 PCT
Amo05g1696 05 33508990 33520244 Amo05g2813 05 73304041 73312005 PCT
Amo15g0262 15 9713442 9722360 Amo05g2813 05 73304041 73312005 PCT