Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2725 ATGAGCTTCTTCCTCTCTCCGTCCACGAGCTTCTTCCGCCACTGCCATCACGGCTCGCGTCGCAGATCTCTCTGTCATCCCTTGCGTCGCACAAGCCCCCTCCTTGTGATTCTGTTGCTTAGGTTTCTATCACATGCTAGTATCTCGAACCGATGCCTCTTCTGTTGTTCTATTATATCTGCAAAGACACTGTGGGATGGTGAGTTCAACAGCAACCACCTTAAGATGGTGAAGCTTGCAGACAAGATTGCAGCTTCTGATTACTATGTGGTTGTTCCAGACTTCTTTTATGGTGAACCCTATGATCCTCAGAATACTAATAGACCTTTAGGAATTGAGACAATAAGCTACTTTGAACCTGTCTCAGCTGCCAATAAGTTTTTCTCATCAAATGGTTTTCCTTACCCAAGGTTGGATCAAAAAATTAAAAAGAAGAGATCTGTTGGCGCTGTAGGAAACAGAGTCATGACTGATGAAAGAGATGTGAAACGATCTGCTCTTCCAAAGTCAAATGTTGATTCGAAGATGCGTCCATTACCAGGAAAGTTTCTTAAGCTTTTAGGTTTCTTGCCTTGTCACGTCTTGAATAGTTTATTAAGCACTCTGGACTCATTTTCTGGACTCATCAATGCACAAATTGTTTTCCAGCTTCTTGCACAGGTATATCCGAAGTTGCAAGATCTTCAGAAAAGAGAAGGCGAGGCTGGAAGAAAGAAAGTTCTTTAA 726 0.4256 MSFFLSPSTSFFRHCHHGSRRRSLCHPLRRTSPLLVILLLRFLSHASISNRCLFCCSIISAKTLWDGEFNSNHLKMVKLADKIAASDYYVVVPDFFYGEPYDPQNTNRPLGIETISYFEPVSAANKFFSSNGFPYPRLDQKIKKKRSVGAVGNRVMTDERDVKRSALPKSNVDSKMRPLPGKFLKLLGFLPCHVLNSLLSTLDSFSGLINAQIVFQLLAQVYPKLQDLQKREGEAGRKKVL* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2725 241 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 177 241 IPR002208 GO:0015031|GO:0016020
Amo05g2725 241 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC 177 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2725 Amo-Chr5 65453591 65457130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2725 178 241 Chloroplast and Mitochondria Gene Families AT2G18710 55.556 2.54e-22 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2725 K10956 - ahf:112803458 130.183