Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2716 ATGGCTTTTGAATGGCAGGTTAAGCTTCTAATGAGAGTATATCATCGAAATCTGATTTCTATTATTGGCTATTGCAATGAAGAAACTAATATAGGATTCATCTATGAATATATGGCAAATGGAAACTTAGATGATCATCTTTCAGTTCCCAGCATCAATAAGGTGGAGGAACGGACTTCTAATTATAACAACTATGCGATTGGTTCTCGTGTGATAGAGTATGGTGATACCAAAATCAAAGCTGTCAAGCTCTCTCTCTTTGAAGGCTTCGATCCTGCATCCACCAACTTCTCTCCAAACAACAACATCCTACCACCACAGACTTCTATTGAAGTTGTTAACCAAAGAGATGCATATCTTTTCTTCATATGGCAAAGGTACAAGATTTTGGAACATGAAACAGAAGAAAAGGCACAAGCCTTGAAGGAGATTACAGAGATGGTGAACCACAGAAATCATATAGATGGTAGT 471 0.3758 MAFEWQVKLLMRVYHRNLISIIGYCNEETNIGFIYEYMANGNLDDHLSVPSINKVEERTSNYNNYAIGSRVIEYGDTKIKAVKLSLFEGFDPASTNFSPNNNILPPQTSIEVVNQRDAYLFFIWQRYKILEHETEEKAQALKEITEMVNHRNHIDGS 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2716 157 PANTHER VACUOLAR-PROCESSING ENZYME BETA-ISOZYME 1 53 157 IPR033165 GO:0004197|GO:0051603
Amo05g2716 157 SUPERFAMILY Protein kinase-like (PK-like) 3 51 IPR011009 -
Amo05g2716 157 Pfam Protein tyrosine and serine/threonine kinase 3 50 IPR001245 GO:0004672|GO:0006468
Amo05g2716 157 PANTHER HEMOGLOBINASE FAMILY MEMBER 53 157 IPR001096 GO:0006508|GO:0008233
Amo05g2716 157 Gene3D Transferase(Phosphotransferase) domain 1 2 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2716 Amo-Chr5 64962057 64963249 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2716 3 75 Receptor kinase-like Gene Family AT3G46400 43.421 3.64e-15 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo05g2716 PK_Tyr_Ser-Thr 1.1e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2716 K01369 - adu:107489415 213.772