Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2707 GCGGAGGAGGGAGGGCGCAGTGCGGGGTGCCAAATGCGGTGGAAGGAGAGGACGCAGAGGCAAGCAAGGAGAGCATTACGGGCACTGAAAGGATTAGTTAAGCTTCAAGCACTTGTGAGAGGCCACATCGAAAGAAAGCGAACAGCACAACAGATGAAAAAATGGCAAGCACTTTTAAGAGCACAAGCTAGAGTCTGTGCTCGCAGAGTTCATATCCTTCAAGCCCCAAATTCCACTTCTAAGTCACCTTCCTGCCACCTTCATGGGCCAGCAACACCAGACAAGTTTGAAAGCCCAATCAGATCTAAGAGCATGAAAGATGAGCACTCACCATTGCTTAAGAGAAATGGCTCCAAATCATGCCTCCAGCAGGTCCATGGTAGTAGCGGGCAAGAGAAATGTAGGAACAAATCAGAAAGGCACATAGATGAACTAACATGGAACCAAGAAAAATCATCAATGAGAACCTCTAGCACCACCAATGGTGACAAAAGTGACAAGAACCCTGAAATTGATTCCAGAAGATCACAAGCCACGTCATCATCAAGACGTAGGAACCTCTTTTCCACCACCAACAACCATGTCTTAGTTTCTGATCAGCATTGCATTAGTAGCAAGAGTTACACCACAAGCAACCACAACAACAACAACAAGGAATCATCATCAGTGATATCTCTTCAATCAGGCCCAAGCCCATCTTGTGAGGTCCAGTCTCAGAGCCCAATGAAGCCCAATTGGGTTGAGGAGAGCCCATTCTGTACAGCTGAAAACAGCCCCCAATACCTATCAGCATCTTCCAAAGATAATGTACCCAAAAGAAGCCCTTTTGGTGGGTCAAGGAGTTATATTTGTGACTATTCTGATTACCCAAGTTACATGGCATGCACTGAATCTTCAAAGGCAAAAGTGAGGTCTCTTAGTGCCCCAAAACAAAGGCCCAACCAATGTGATAGGTCTAGTTCATCTACTAGGTACTCACTCAATGGATTGGGTTGTCAGAGGCCCAATTATGCTTTGCAAGGATGCTTCACCAACAAGGGTTATCCAGGTTCTGGTCGTTTGGACAAGCTTGGAATGCCTGTGGGATATAGATTCTAA 1098 0.4599 AEEGGRSAGCQMRWKERTQRQARRALRALKGLVKLQALVRGHIERKRTAQQMKKWQALLRAQARVCARRVHILQAPNSTSKSPSCHLHGPATPDKFESPIRSKSMKDEHSPLLKRNGSKSCLQQVHGSSGQEKCRNKSERHIDELTWNQEKSSMRTSSTTNGDKSDKNPEIDSRRSQATSSSRRRNLFSTTNNHVLVSDQHCISSKSYTTSNHNNNNKESSSVISLQSGPSPSCEVQSQSPMKPNWVEESPFCTAENSPQYLSASSKDNVPKRSPFGGSRSYICDYSDYPSYMACTESSKAKVRSLSAPKQRPNQCDRSSSSTRYSLNGLGCQRPNYALQGCFTNKGYPGSGRLDKLGMPVGYRF* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2707 365 MobiDBLite consensus disorder prediction 165 179 - -
Amo05g2707 365 MobiDBLite consensus disorder prediction 77 193 - -
Amo05g2707 365 MobiDBLite consensus disorder prediction 116 131 - -
Amo05g2707 365 MobiDBLite consensus disorder prediction 207 250 - -
Amo05g2707 365 Pfam Protein of unknown function (DUF4005) 259 327 IPR025064 -
Amo05g2707 365 PANTHER IQ-DOMAIN 5-RELATED 22 360 - -
Amo05g2707 365 MobiDBLite consensus disorder prediction 132 148 - -
Amo05g2707 365 ProSiteProfiles IQ motif profile. 30 57 IPR000048 GO:0005515
Amo05g2707 365 MobiDBLite consensus disorder prediction 99 114 - -
Amo05g2707 365 MobiDBLite consensus disorder prediction 149 164 - -
Amo05g2707 365 PANTHER CALMODULIN BINDING PROTEIN IQD22 22 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2707 Amo-Chr5 64261620 64265848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2707 22 365 IQD Protein Family AT4G23060 38.462 4.31e-54 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2707 - - adu:107490560 678.322