Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2704 ATGAACGCGAAAATATCAGACTTTGGTCTTGCTAGGACATTTGCCGGAGATCAATCTGAGGCCACAACAAAAAGAGTGATGGGAACTTATGGCTATATTTCTCCTGAGTATGCAGTGCACGGATCCTTCTCAACGAAATCTGATGTGTTCGCCTTTGGCGTAATTGTGCTTGAGATAGTCAGTGGGAAGAAGAACAGAGAGTTTTGCGTCCCTCACCAACGTCTCTACCTTCTTGGACATGCATGGGAGCTCTGGAATGAGGAGAGGCCTTTGGAGCTAGTGGATGAATCAGTGCGCGATTCGGTCATTGAAGTTGAAGCATTYAGATGCATACAGATAGGGCTTTTATGTGTTCAAGGGAGACCAGAAGATAGGCCTAACATGTCATCTGTAGTTCGCTGCCGGCGTTTTACTCGCACCATGAAGAATCTCTGGGAAGAGATGATGAAGTTTCAGCAAATGAGGTTACCGTTTCATCGTTAG 483 0.4576 MNAKISDFGLARTFAGDQSEATTKRVMGTYGYISPEYAVHGSFSTKSDVFAFGVIVLEIVSGKKNREFCVPHQRLYLLGHAWELWNEERPLELVDESVRDSVIEVEAFRCIQIGLLCVQGRPEDRPNMSSVVRCRRFTRTMKNLWEEMMKFQQMRLPFHR* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2704 160 Pfam Protein tyrosine and serine/threonine kinase 3 133 IPR001245 GO:0004672|GO:0006468
Amo05g2704 160 SUPERFAMILY Protein kinase-like (PK-like) 1 149 IPR011009 -
Amo05g2704 160 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 132 - -
Amo05g2704 160 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 132 - -
Amo05g2704 160 ProSiteProfiles Protein kinase domain profile. 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g2704 160 Gene3D Transferase(Phosphotransferase) domain 1 1 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2704 Amo-Chr5 63806699 63807382 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2704 1 131 Receptor kinase-like Gene Family AT4G11480 53.788 5.92e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo05g2704 PK_Tyr_Ser-Thr 2.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2704 - - ahf:114924322 310.457