Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2703 ATGCAAAACAAGAAAAATCTATGGTTTTGGTCCATTCTATTGTCATTTATATTAAGAAACTCTACCTCGCTGGACAATATAACTCCTTTTCAATCCATCACTGATGGAGAGACATTAATTTCGAGTGGAGGAACCTTTGAACTTGGCTTCTACAGCCCCGGAAATTCAAAGGGCCGATACTTAGGAATCTGGTACCATAACATATCCCCTCAGGTAGTGGTCTGGGTGGCTAATAGAGAAAAACCGCTCAACAACACCTCCGGAATTCTAAAAGTCACCGGTGAAGGACTTGTTGTCCTTATTAATGGCAGCACCAACAGCAGCGTTGTATGGTCCTCCAACATGTCAAGCAAAGCAGGAGACAAACGGAATCCAATTGCACAGCTCTTGGAATCAGGAAATCTTGTTGTCAAAGATGGTCATAATAGTGACCACTTTCTGTGGCAGAGCTTTGATTATCCTTGTGATACATTCGTGCCCGGAATGAAGCTGGGATGGGATCTTGGGACAAGTCTAGAGAGGACTCTATCATCTTCAAAAAGTACTGATGATCCCGGCCGCGGACACTACACATTTAGAATAGACCTTCGAGGCGATCCGCAAATAGTTCTAATGAATGGAAATGCCACAACAATTAGAGTAGGGCCATGGAATGGGCTAATGTTTTCAGGAGCTACACTTTATTTGCGCTATAGCCAATTCTCATCTCAATTTGTTTTCAATGAAAAAGAGGTGTTTGTTAGGTTCAGACCAGAAAATACATCCAAATATATTAGAGGTGTAGTGTACCCTTGGGGAGGTATTCAGGTTTTGCATTGGTCAATACAAACCAGAGGCTGGGAGACCCTTATTTCTATACCGGAGGCTGAATGTGACAAGTATGCTCTGTGTGGTGCAAATTCTATTTGCAGTACTACCCCTACTCCTGTCTGTTCATGCCTTGAAGGATTCGCACCAAAATATCCTGGAAAATGGAAGGAATCTGATTGGTCTGATGGTTGTGTTAGGATCACTCCTTTAAGTTGCAGCAGAGATGGATTCAAGAAGGTCACCAGCATAGTATTGCCGGACACGTCTGCTTCTTGGTATAACAGGACCATGAACCTGCTGGAATGCAAGGAATTCTGTCTGAAAAATTGTTCTTGTACGGCATATTCCAATTTGGATATCCGTGATGGAGGAAGCGGTTGCTTGATCTGGTTTCATGATCTTATTGACATTAGACAAGGGACACAAGACTTCTATATTCGAATAGATGATAAGAAGAAAAATTATTCCAGCAAGAGTAAGCTAGAAGGCATCATTGTTGGCTCTATATTGTTCATCACGATCATAATACTTGGACTGAAATTATTTCTATGGAGAAAAAAACTTGAGGATCCAGATATATTTTGGTTGAAACATGTTCGCAAAATGGAAAAGGAAGACGCGGACTTTCCAACATTTGATTTATCAACTATAATTTATGCTACTGATCAATTTTCTAGCAGTAATGAAATGGGAAGAGGAGGATATGGACCAGTTTATAAGGGTGTACTTGCAAACGGGACAGAGATTGCAGTCAAGAGACTTTGCAAGAACTCCGACCAAGGACTGCAAGAGTTCAAAACGGAAGTTCAGCTAATTGCAAAACTTCAGCATCGCAACCTCGTAAAGCTTCTTGGTTGTTGCATTCAGCAAGAAGAGAAACTTTTGATTTATGAGCTCATGCCCAACAGGAATGATGCTAGAAGAAAATTATTGGATTGGACTAAGCGCTTTCACATTATTAGTGGTACAGCTAGAGGCCTAGTCTATCTGCATCAGGACTCTAGTAATATTCTTCTTGACGAAGAAATGAATGCAAAAATATCAGACTTCGGTCTTGCTAGGACATTTGCAAGTGATCAGACTGAAGACAAGACTGGAAGAGTGGTGGAACTCAGTAATGGTTATATTTCGCCCGAGTATGCAGTGCGTGGATCTTTCTCAATGAAATCTGATGTGTTCGCCTTTGGTGTAATCGTGCTTGAGGTAGTCAGTGGGAGGAAGACAAGAGAGTTTTGTGTCCCAGACCAAAGTCTTAACCTTCTGGGATTTGCATGGAAGCTATGGAATGAGGAGAGGACTTTGGAGCTGGTAGATGAATCACTGCGTGATTCGGTGAATGAAGATGAAGCATTGAGATGTATTCAGARAGGGRTGTTYTGTGTGCAAGAGAGACCAGAACATAGGCCTAACATGTCATCTGTAGTTCGTATGTTGGATGATGATAAACCATTGCCTCGGCCAAGGTTGCCGGCATTTTATTCACACCAACAAGATTCTACACTGATTGAAGGTGAAGATGGTGAAGAAGTTCATTCAGCAAATGAGGTTACCATATCATTGTTAGGGGCAAGGTAG 2385 0.4164 MQNKKNLWFWSILLSFILRNSTSLDNITPFQSITDGETLISSGGTFELGFYSPGNSKGRYLGIWYHNISPQVVVWVANREKPLNNTSGILKVTGEGLVVLINGSTNSSVVWSSNMSSKAGDKRNPIAQLLESGNLVVKDGHNSDHFLWQSFDYPCDTFVPGMKLGWDLGTSLERTLSSSKSTDDPGRGHYTFRIDLRGDPQIVLMNGNATTIRVGPWNGLMFSGATLYLRYSQFSSQFVFNEKEVFVRFRPENTSKYIRGVVYPWGGIQVLHWSIQTRGWETLISIPEAECDKYALCGANSICSTTPTPVCSCLEGFAPKYPGKWKESDWSDGCVRITPLSCSRDGFKKVTSIVLPDTSASWYNRTMNLLECKEFCLKNCSCTAYSNLDIRDGGSGCLIWFHDLIDIRQGTQDFYIRIDDKKKNYSSKSKLEGIIVGSILFITIIILGLKLFLWRKKLEDPDIFWLKHVRKMEKEDADFPTFDLSTIIYATDQFSSSNEMGRGGYGPVYKGVLANGTEIAVKRLCKNSDQGLQEFKTEVQLIAKLQHRNLVKLLGCCIQQEEKLLIYELMPNRNDARRKLLDWTKRFHIISGTARGLVYLHQDSSNILLDEEMNAKISDFGLARTFASDQTEDKTGRVVELSNGYISPEYAVRGSFSMKSDVFAFGVIVLEVVSGRKTREFCVPDQSLNLLGFAWKLWNEERTLELVDESLRDSVNEDEALRCIQXGXFCVQERPEHRPNMSSVVRMLDDDKPLPRPRLPAFYSHQQDSTLIEGEDGEEVHSANEVTISLLGAR* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2703 794 Pfam S-locus glycoprotein domain 213 320 IPR000858 GO:0048544
Amo05g2703 794 ProSiteProfiles PAN/Apple domain profile. 342 419 IPR003609 -
Amo05g2703 794 Gene3D Hepatocyte Growth Factor 340 417 - -
Amo05g2703 794 PIRSF SRK 4 794 IPR024171 GO:0004674
Amo05g2703 794 Pfam D-mannose binding lectin 73 180 IPR001480 -
Amo05g2703 794 Gene3D Transferase(Phosphotransferase) domain 1 569 754 - -
Amo05g2703 794 PANTHER - 13 790 - -
Amo05g2703 794 CDD PAN_AP_plant 338 418 - -
Amo05g2703 794 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Amo05g2703 794 Gene3D Phosphorylase Kinase; domain 1 464 568 - -
Amo05g2703 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 183 IPR036426 -
Amo05g2703 794 Gene3D - 20 151 IPR036426 -
Amo05g2703 794 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 13 790 - -
Amo05g2703 794 SUPERFAMILY Protein kinase-like (PK-like) 478 766 IPR011009 -
Amo05g2703 794 Pfam PAN-like domain 342 407 IPR003609 -
Amo05g2703 794 SMART ntp_6 342 418 IPR003609 -
Amo05g2703 794 CDD B_lectin 31 154 IPR001480 -
Amo05g2703 794 CDD STKc_IRAK 500 749 - -
Amo05g2703 794 ProSiteProfiles Protein kinase domain profile. 494 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g2703 794 SMART blect_4 30 154 IPR001480 -
Amo05g2703 794 Pfam Protein tyrosine and serine/threonine kinase 497 748 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2703 Amo-Chr5 63800716 63804100 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2703 452 763 Receptor kinase-like Gene Family AT4G23140 48.512 2.61e-96 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo05g2703 PK_Tyr_Ser-Thr 2.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2703 - - aip:107611884 1568.13